GCSAML report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
mast cell	19 studies	31% ± 15%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	28% ± 15%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	98%	464.24	240 / 245	77%	6.29	386 / 502
lung	98%	124.25	567 / 578	10%	0.22	118 / 1155
bladder	95%	110.38	20 / 21	2%	0.03	10 / 504
stomach	91%	60.69	325 / 359	4%	0.05	11 / 286
esophagus	86%	90.91	1248 / 1445	3%	0.06	5 / 183
breast	77%	47.64	352 / 459	12%	0.23	132 / 1118
adipose	87%	80.35	1052 / 1204	0%	0	0 / 0
intestine	85%	70.89	823 / 966	2%	0.02	9 / 527
uterus	73%	47.12	124 / 170	2%	0.03	7 / 459
skin	62%	51.99	1128 / 1809	5%	0.33	25 / 472
spleen	51%	16.22	123 / 241	0%	0	0 / 0
peripheral blood	47%	27.85	439 / 929	0%	0	0 / 0
brain	29%	132.22	778 / 2642	1%	0.07	4 / 705
blood vessel	28%	10.37	378 / 1335	0%	0	0 / 0
kidney	17%	8.79	15 / 89	5%	0.08	43 / 901
pancreas	12%	3.11	38 / 328	4%	0.07	7 / 178
ovary	6%	1.78	11 / 180	6%	0.18	25 / 430
liver	9%	2.30	20 / 226	3%	0.09	12 / 406
thymus	9%	2.66	58 / 653	3%	0.04	16 / 605
heart	9%	2.35	78 / 861	0%	0	0 / 0
muscle	6%	1.73	52 / 803	0%	0	0 / 0
adrenal gland	2%	0.75	6 / 258	2%	0.03	4 / 230
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1