Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 13 studies | 57% ± 22% | |
oligodendrocyte precursor cell | 10 studies | 24% ± 9% | |
neuron | 10 studies | 56% ± 20% | |
GABAergic neuron | 8 studies | 39% ± 19% | |
interneuron | 8 studies | 37% ± 20% | |
retinal ganglion cell | 5 studies | 59% ± 25% | |
granule cell | 4 studies | 42% ± 12% | |
endothelial cell | 3 studies | 42% ± 18% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 16 studies | 36% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 97% | 15373.37 | 2560 / 2642 | 100% | 565.79 | 703 / 705 |
pancreas | 0% | 0 | 0 / 328 | 62% | 8.75 | 110 / 178 |
adrenal gland | 1% | 22.18 | 2 / 258 | 50% | 19.11 | 115 / 230 |
thymus | 0% | 0 | 0 / 653 | 48% | 20.28 | 290 / 605 |
intestine | 30% | 396.15 | 285 / 966 | 8% | 1.83 | 43 / 527 |
lung | 0% | 0 | 0 / 578 | 24% | 2.75 | 273 / 1155 |
skin | 0% | 1.79 | 2 / 1809 | 20% | 19.67 | 93 / 472 |
bladder | 5% | 43.67 | 1 / 21 | 15% | 2.39 | 74 / 504 |
stomach | 8% | 89.50 | 27 / 359 | 10% | 1.08 | 30 / 286 |
esophagus | 3% | 30.85 | 43 / 1445 | 15% | 1.29 | 27 / 183 |
uterus | 0% | 0 | 0 / 170 | 13% | 2.43 | 61 / 459 |
blood vessel | 10% | 141.28 | 140 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.67 | 4 / 45 |
prostate | 1% | 12.61 | 3 / 245 | 7% | 0.67 | 37 / 502 |
eye | 0% | 0 | 0 / 0 | 8% | 0.82 | 6 / 80 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.74 | 2 / 29 |
ovary | 0% | 0 | 0 / 180 | 5% | 0.59 | 21 / 430 |
heart | 3% | 39.05 | 29 / 861 | 0% | 0 | 0 / 0 |
breast | 0% | 2.39 | 1 / 459 | 3% | 0.25 | 28 / 1118 |
kidney | 0% | 0 | 0 / 89 | 3% | 0.35 | 24 / 901 |
liver | 0% | 0 | 0 / 226 | 2% | 0.22 | 9 / 406 |
peripheral blood | 0% | 1.92 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adipose | 0% | 0 | 0 / 1204 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0051489 | Biological process | regulation of filopodium assembly |
GO_0010996 | Biological process | response to auditory stimulus |
GO_0031103 | Biological process | axon regeneration |
GO_0016198 | Biological process | axon choice point recognition |
GO_0060019 | Biological process | radial glial cell differentiation |
GO_0099150 | Biological process | regulation of postsynaptic specialization assembly |
GO_0042246 | Biological process | tissue regeneration |
GO_0048708 | Biological process | astrocyte differentiation |
GO_0045165 | Biological process | cell fate commitment |
GO_0009611 | Biological process | response to wounding |
GO_0040008 | Biological process | regulation of growth |
GO_0007205 | Biological process | protein kinase C-activating G protein-coupled receptor signaling pathway |
GO_0098793 | Cellular component | presynapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0043204 | Cellular component | perikaryon |
GO_0030425 | Cellular component | dendrite |
GO_0098982 | Cellular component | GABA-ergic synapse |
GO_0031527 | Cellular component | filopodium membrane |
GO_0014069 | Cellular component | postsynaptic density |
GO_0005737 | Cellular component | cytoplasm |
GO_0032584 | Cellular component | growth cone membrane |
GO_0001786 | Molecular function | phosphatidylserine binding |
GO_0035727 | Molecular function | lysophosphatidic acid binding |
GO_0005516 | Molecular function | calmodulin binding |
GO_1901981 | Molecular function | phosphatidylinositol phosphate binding |
GO_0005515 | Molecular function | protein binding |
Gene name | GAP43 |
Protein name | Neuromodulin (Axonal membrane protein GAP-43) (Growth-associated protein 43) (Neural phosphoprotein B-50) (pp46) Neuromodulin (Axonal membrane protein GAP-43) (Growth-associated protein 43) |
Synonyms | hCG_2022854 |
Description | FUNCTION: This protein is associated with nerve growth. It is a major component of the motile 'growth cones' that form the tips of elongating axons. Plays a role in axonal and dendritic filopodia induction. . FUNCTION: This protein is associated with nerve growth. It is a major component of the motile 'growth cones' that form the tips of elongating axons. Plays a role in axonal and dendritic filopodia induction. . |
Accessions | Q5U058 ENST00000393780.3 [P17677-2] ENST00000305124.11 [P17677-1] P17677 |