Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 28 studies | 39% ± 22% | |
endothelial cell | 27 studies | 37% ± 18% | |
pericyte | 22 studies | 31% ± 19% | |
astrocyte | 18 studies | 48% ± 19% | |
microglial cell | 18 studies | 79% ± 21% | |
smooth muscle cell | 17 studies | 36% ± 20% | |
fibroblast | 15 studies | 33% ± 16% | |
oligodendrocyte precursor cell | 14 studies | 54% ± 17% | |
glutamatergic neuron | 12 studies | 86% ± 17% | |
GABAergic neuron | 11 studies | 81% ± 18% | |
adipocyte | 11 studies | 72% ± 17% | |
oligodendrocyte | 11 studies | 38% ± 16% | |
myeloid cell | 10 studies | 42% ± 18% | |
neuron | 8 studies | 57% ± 24% | |
capillary endothelial cell | 7 studies | 21% ± 3% | |
interneuron | 7 studies | 82% ± 27% | |
retina horizontal cell | 6 studies | 53% ± 27% | |
dendritic cell | 6 studies | 27% ± 3% | |
glial cell | 5 studies | 37% ± 19% | |
amacrine cell | 5 studies | 58% ± 26% | |
cardiac muscle cell | 5 studies | 20% ± 4% | |
mesothelial cell | 5 studies | 44% ± 19% | |
Mueller cell | 5 studies | 60% ± 20% | |
endothelial cell of vascular tree | 5 studies | 28% ± 10% | |
alveolar macrophage | 5 studies | 50% ± 26% | |
granule cell | 4 studies | 54% ± 29% | |
retinal bipolar neuron | 4 studies | 49% ± 34% | |
vein endothelial cell | 4 studies | 24% ± 7% | |
ON-bipolar cell | 4 studies | 53% ± 27% | |
retinal cone cell | 4 studies | 49% ± 25% | |
retinal ganglion cell | 4 studies | 75% ± 11% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 62% ± 13% | |
neural crest cell | 3 studies | 20% ± 1% | |
GABAergic interneuron | 3 studies | 87% ± 13% | |
epithelial cell | 3 studies | 40% ± 13% | |
progenitor cell | 3 studies | 58% ± 31% | |
mast cell | 3 studies | 29% ± 11% | |
GABAergic amacrine cell | 3 studies | 83% ± 8% | |
OFF-bipolar cell | 3 studies | 76% ± 11% | |
glycinergic amacrine cell | 3 studies | 45% ± 27% | |
rod bipolar cell | 3 studies | 53% ± 23% | |
retinal pigment epithelial cell | 3 studies | 52% ± 18% | |
neural progenitor cell | 3 studies | 36% ± 12% | |
connective tissue cell | 3 studies | 22% ± 7% | |
erythrocyte | 3 studies | 32% ± 16% | |
monocyte | 3 studies | 35% ± 26% | |
type I pneumocyte | 3 studies | 25% ± 4% | |
Schwann cell | 3 studies | 61% ± 26% | |
basal cell | 3 studies | 37% ± 27% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 4116.55 | 459 / 459 | 99% | 5.87 | 1109 / 1118 |
prostate | 100% | 2302.16 | 245 / 245 | 99% | 4.70 | 496 / 502 |
brain | 100% | 2034.00 | 2630 / 2642 | 99% | 7.18 | 698 / 705 |
skin | 100% | 3117.05 | 1809 / 1809 | 99% | 10.77 | 465 / 472 |
esophagus | 100% | 1875.77 | 1441 / 1445 | 97% | 4.42 | 178 / 183 |
pancreas | 100% | 1474.11 | 327 / 328 | 93% | 3.02 | 166 / 178 |
ovary | 98% | 1179.94 | 177 / 180 | 94% | 4.18 | 403 / 430 |
kidney | 100% | 2254.08 | 89 / 89 | 90% | 5.72 | 814 / 901 |
thymus | 100% | 1994.23 | 652 / 653 | 90% | 2.82 | 544 / 605 |
lung | 100% | 2703.23 | 578 / 578 | 89% | 2.90 | 1023 / 1155 |
stomach | 100% | 1449.11 | 358 / 359 | 88% | 2.82 | 252 / 286 |
bladder | 100% | 1639.24 | 21 / 21 | 85% | 2.86 | 430 / 504 |
uterus | 100% | 1389.61 | 170 / 170 | 83% | 3.00 | 382 / 459 |
intestine | 100% | 2205.95 | 964 / 966 | 79% | 1.96 | 418 / 527 |
liver | 95% | 1091.50 | 215 / 226 | 73% | 2.90 | 295 / 406 |
adrenal gland | 95% | 888.82 | 244 / 258 | 53% | 1.56 | 123 / 230 |
adipose | 100% | 4875.01 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3751.21 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 4577.30 | 241 / 241 | 0% | 0 | 0 / 0 |
heart | 100% | 1941.82 | 860 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 4.30 | 43 / 45 |
lymph node | 0% | 0 | 0 / 0 | 76% | 2.24 | 22 / 29 |
eye | 0% | 0 | 0 / 0 | 55% | 1.23 | 44 / 80 |
muscle | 50% | 340.94 | 399 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 28% | 647.93 | 258 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0050714 | Biological process | positive regulation of protein secretion |
GO_0090162 | Biological process | establishment of epithelial cell polarity |
GO_0050709 | Biological process | negative regulation of protein secretion |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005912 | Cellular component | adherens junction |
GO_0005737 | Cellular component | cytoplasm |
GO_0005923 | Cellular component | bicellular tight junction |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
Gene name | FRMD4A |
Protein name | FERM domain-containing protein 4A FERM domain containing 4A |
Synonyms | hCG_1811390 KIAA1294 FRMD4 |
Description | FUNCTION: Scaffolding protein that regulates epithelial cell polarity by connecting ARF6 activation with the PAR3 complex (By similarity). Plays a redundant role with FRMD4B in epithelial polarization (By similarity). May regulate MAPT secretion by activating ARF6-signaling . . |
Accessions | A0A3B3ISB3 S4R324 A0A3B3ISM9 ENST00000650137.1 ENST00000477221.2 A0A3B3ISM0 Q5T376 A0A0J9YXB2 ENST00000648761.1 ENST00000632570.1 A0A3B3ISR1 ENST00000493380.5 ENST00000649947.1 A0A0J9YWI3 A0A0J9YYA7 ENST00000475141.2 ENST00000649423.1 ENST00000495956.3 ENST00000649246.1 ENST00000649099.1 S4R3Y6 ENST00000649155.1 A0A1W2PQE7 ENST00000648400.1 Q9P2Q2 A0A3B3IS86 ENST00000357447.7 ENST00000264546.10 ENST00000640906.1 A0A3B3IRJ0 ENST00000650014.1 |