Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 8 studies | 24% ± 8% | |
mast cell | 5 studies | 22% ± 5% | |
GABAergic neuron | 5 studies | 35% ± 12% | |
adipocyte | 4 studies | 35% ± 9% | |
renal beta-intercalated cell | 3 studies | 45% ± 19% | |
GABAergic interneuron | 3 studies | 17% ± 2% | |
glutamatergic neuron | 3 studies | 38% ± 11% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 35% ± 16% | |
astrocyte | 3 studies | 34% ± 14% | |
interneuron | 3 studies | 34% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 99% | 1235.40 | 325 / 328 | 70% | 3.13 | 125 / 178 |
intestine | 92% | 1493.73 | 884 / 966 | 59% | 6.53 | 313 / 527 |
kidney | 100% | 2107.70 | 89 / 89 | 51% | 2.74 | 457 / 901 |
brain | 62% | 683.12 | 1648 / 2642 | 72% | 3.34 | 511 / 705 |
lung | 90% | 652.43 | 518 / 578 | 43% | 1.36 | 496 / 1155 |
breast | 87% | 727.56 | 399 / 459 | 45% | 1.42 | 498 / 1118 |
uterus | 99% | 2900.75 | 168 / 170 | 31% | 2.60 | 144 / 459 |
bladder | 81% | 560.71 | 17 / 21 | 46% | 2.48 | 232 / 504 |
skin | 56% | 278.44 | 1020 / 1809 | 44% | 8.18 | 209 / 472 |
adrenal gland | 87% | 508.11 | 224 / 258 | 13% | 0.34 | 30 / 230 |
blood vessel | 99% | 1958.72 | 1320 / 1335 | 0% | 0 | 0 / 0 |
prostate | 58% | 244.87 | 142 / 245 | 40% | 0.77 | 200 / 502 |
stomach | 35% | 209.55 | 127 / 359 | 61% | 5.09 | 175 / 286 |
ovary | 65% | 419.27 | 117 / 180 | 31% | 1.25 | 135 / 430 |
adipose | 91% | 662.67 | 1094 / 1204 | 0% | 0 | 0 / 0 |
heart | 80% | 755.75 | 685 / 861 | 0% | 0 | 0 / 0 |
esophagus | 44% | 244.78 | 630 / 1445 | 28% | 1.25 | 51 / 183 |
thymus | 47% | 186.96 | 304 / 653 | 12% | 0.54 | 72 / 605 |
muscle | 19% | 60.45 | 152 / 803 | 0% | 0 | 0 / 0 |
liver | 8% | 20.58 | 17 / 226 | 9% | 0.60 | 35 / 406 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.20 | 4 / 29 |
spleen | 14% | 54.83 | 33 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.10 | 4 / 45 |
peripheral blood | 0% | 2.17 | 3 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007154 | Biological process | cell communication |
GO_0097094 | Biological process | craniofacial suture morphogenesis |
GO_0007160 | Biological process | cell-matrix adhesion |
GO_0009653 | Biological process | anatomical structure morphogenesis |
GO_0005604 | Cellular component | basement membrane |
GO_0005576 | Cellular component | extracellular region |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0016020 | Cellular component | membrane |
GO_0030246 | Molecular function | carbohydrate binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | FREM1 |
Protein name | FRAS1 related extracellular matrix 1 FRAS1-related extracellular matrix protein 1 (Protein QBRICK) |
Synonyms | C9orf143 C9orf154 C9orf145 |
Description | FUNCTION: Extracellular matrix protein that plays a role in epidermal differentiation and is required for epidermal adhesion during embryonic development. . |
Accessions | ENST00000380880.4 [Q5H8C1-1] ENST00000427623.5 [Q5H8C1-4] ENST00000380875.7 Q5H8C1 F8WE85 ENST00000380894.5 [Q5H8C1-2] |