Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 13 studies | 27% ± 12% | |
| astrocyte | 11 studies | 36% ± 19% | |
| macrophage | 6 studies | 28% ± 9% | |
| endothelial cell of lymphatic vessel | 5 studies | 25% ± 5% | |
| type I pneumocyte | 5 studies | 22% ± 4% | |
| cardiac muscle cell | 4 studies | 17% ± 2% | |
| GABAergic neuron | 4 studies | 27% ± 2% | |
| glutamatergic neuron | 4 studies | 35% ± 7% | |
| club cell | 4 studies | 23% ± 8% | |
| type II pneumocyte | 4 studies | 19% ± 3% | |
| epithelial cell | 3 studies | 22% ± 4% | |
| monocyte | 3 studies | 16% ± 0% | |
| interneuron | 3 studies | 22% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 26% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 1309.22 | 1444 / 1445 | 100% | 22.76 | 183 / 183 |
| lung | 100% | 1896.80 | 578 / 578 | 99% | 18.16 | 1142 / 1155 |
| pancreas | 100% | 873.90 | 327 / 328 | 93% | 14.79 | 165 / 178 |
| breast | 97% | 864.89 | 446 / 459 | 95% | 15.34 | 1059 / 1118 |
| intestine | 100% | 1823.15 | 966 / 966 | 91% | 8.84 | 477 / 527 |
| uterus | 100% | 1094.80 | 170 / 170 | 89% | 10.26 | 408 / 459 |
| thymus | 100% | 1734.77 | 652 / 653 | 88% | 8.93 | 530 / 605 |
| kidney | 100% | 908.85 | 89 / 89 | 87% | 10.62 | 787 / 901 |
| bladder | 100% | 1015.14 | 21 / 21 | 82% | 8.17 | 413 / 504 |
| stomach | 83% | 706.79 | 298 / 359 | 94% | 11.20 | 268 / 286 |
| adrenal gland | 100% | 1487.45 | 258 / 258 | 66% | 3.84 | 151 / 230 |
| prostate | 99% | 1006.96 | 242 / 245 | 60% | 3.32 | 301 / 502 |
| ovary | 100% | 1394.63 | 180 / 180 | 53% | 3.05 | 228 / 430 |
| brain | 98% | 870.23 | 2595 / 2642 | 53% | 2.63 | 376 / 705 |
| skin | 100% | 2148.83 | 1809 / 1809 | 25% | 1.21 | 117 / 472 |
| liver | 74% | 289.00 | 168 / 226 | 46% | 5.23 | 187 / 406 |
| ureter | 0% | 0 | 0 / 0 | 100% | 12.91 | 1 / 1 |
| spleen | 98% | 625.15 | 237 / 241 | 0% | 0 | 0 / 0 |
| adipose | 98% | 766.43 | 1179 / 1204 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 96% | 15.03 | 43 / 45 |
| heart | 90% | 661.52 | 775 / 861 | 0% | 0 | 0 / 0 |
| blood vessel | 89% | 552.54 | 1194 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 87% | 395.55 | 698 / 803 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 79% | 6.65 | 23 / 29 |
| peripheral blood | 24% | 219.21 | 226 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 1% | 0.10 | 1 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0046847 | Biological process | filopodium assembly |
| GO_0008360 | Biological process | regulation of cell shape |
| GO_0030036 | Biological process | actin cytoskeleton organization |
| GO_0043087 | Biological process | regulation of GTPase activity |
| GO_0007010 | Biological process | cytoskeleton organization |
| GO_0001726 | Cellular component | ruffle |
| GO_0005856 | Cellular component | cytoskeleton |
| GO_0030027 | Cellular component | lamellipodium |
| GO_0005794 | Cellular component | Golgi apparatus |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
| GO_0031267 | Molecular function | small GTPase binding |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | FGD6 |
| Protein name | FYVE, RhoGEF and PH domain containing 6 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 (Zinc finger FYVE domain-containing protein 24) FGD6 protein |
| Synonyms | ZFYVE24 KIAA1362 |
| Description | FUNCTION: May activate CDC42, a member of the Ras-like family of Rho- and Rac proteins, by exchanging bound GDP for free GTP. May play a role in regulating the actin cytoskeleton and cell shape (By similarity). . |
| Accessions | H0YI21 ENST00000451107.3 ENST00000546711.5 [Q6ZV73-2] F8VWT6 ENST00000549499.1 F8VQX5 F8VY01 A4FVC4 A0A2X0SFJ2 ENST00000551521.5 Q6ZV73 ENST00000548069.5 ENST00000343958.9 [Q6ZV73-1] |