Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 25% ± 6% | |
glutamatergic neuron | 7 studies | 39% ± 24% | |
endothelial cell of lymphatic vessel | 6 studies | 24% ± 6% | |
macrophage | 6 studies | 23% ± 5% | |
oligodendrocyte | 6 studies | 25% ± 6% | |
microglial cell | 5 studies | 25% ± 6% | |
epithelial cell | 5 studies | 28% ± 8% | |
GABAergic neuron | 5 studies | 39% ± 20% | |
astrocyte | 5 studies | 27% ± 6% | |
ciliated cell | 4 studies | 18% ± 1% | |
fibroblast | 4 studies | 23% ± 11% | |
oligodendrocyte precursor cell | 4 studies | 33% ± 7% | |
interneuron | 4 studies | 35% ± 21% | |
basal cell | 3 studies | 20% ± 5% | |
hepatocyte | 3 studies | 32% ± 16% | |
dendritic cell | 3 studies | 18% ± 2% | |
monocyte | 3 studies | 19% ± 2% | |
type I pneumocyte | 3 studies | 18% ± 2% | |
type II pneumocyte | 3 studies | 18% ± 3% | |
transit amplifying cell | 3 studies | 20% ± 5% | |
adipocyte | 3 studies | 20% ± 5% | |
neuron | 3 studies | 27% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2136.86 | 1445 / 1445 | 100% | 38.74 | 183 / 183 |
ovary | 100% | 1866.48 | 180 / 180 | 100% | 20.62 | 430 / 430 |
prostate | 100% | 1906.67 | 245 / 245 | 100% | 29.99 | 502 / 502 |
breast | 100% | 2155.79 | 459 / 459 | 100% | 47.14 | 1117 / 1118 |
lung | 100% | 1771.92 | 577 / 578 | 100% | 32.28 | 1155 / 1155 |
brain | 100% | 1693.04 | 2629 / 2642 | 100% | 26.94 | 705 / 705 |
uterus | 100% | 1942.76 | 170 / 170 | 99% | 25.90 | 456 / 459 |
bladder | 100% | 2052.57 | 21 / 21 | 99% | 23.02 | 500 / 504 |
thymus | 100% | 1765.69 | 652 / 653 | 99% | 23.19 | 599 / 605 |
intestine | 100% | 1989.43 | 966 / 966 | 99% | 24.34 | 520 / 527 |
stomach | 100% | 1392.95 | 359 / 359 | 98% | 25.57 | 281 / 286 |
pancreas | 99% | 929.88 | 324 / 328 | 99% | 22.90 | 176 / 178 |
skin | 100% | 3778.28 | 1809 / 1809 | 97% | 31.36 | 460 / 472 |
kidney | 100% | 1470.09 | 89 / 89 | 97% | 24.33 | 877 / 901 |
liver | 100% | 1373.31 | 226 / 226 | 96% | 14.19 | 389 / 406 |
adrenal gland | 100% | 1525.95 | 258 / 258 | 93% | 15.19 | 215 / 230 |
adipose | 100% | 2241.79 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2141.69 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 16.68 | 29 / 29 |
muscle | 100% | 1871.87 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1582.20 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 26.03 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.52 | 1 / 1 |
heart | 96% | 1030.66 | 830 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 15.59 | 73 / 80 |
peripheral blood | 75% | 885.07 | 701 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000209 | Biological process | protein polyubiquitination |
GO_0000776 | Cellular component | kinetochore |
GO_0005515 | Molecular function | protein binding |
GO_0042802 | Molecular function | identical protein binding |
Gene name | FBXO28 |
Protein name | F-box protein 28 (cDNA FLJ50331, highly similar to F-box only protein 28) F-box only protein 28 |
Synonyms | CENP-30 KIAA0483 |
Description | FUNCTION: Probably recognizes and binds to some phosphorylated proteins and promotes their ubiquitination and degradation. . |
Accessions | ENST00000523990.1 B4E0H5 ENST00000366862.10 [Q9NVF7-1] ENST00000424254.6 [Q9NVF7-2] Q9NVF7 |