Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 10 studies | 26% ± 9% | |
oligodendrocyte | 10 studies | 28% ± 10% | |
oligodendrocyte precursor cell | 9 studies | 31% ± 14% | |
GABAergic neuron | 8 studies | 32% ± 20% | |
astrocyte | 8 studies | 29% ± 12% | |
microglial cell | 7 studies | 24% ± 6% | |
interneuron | 5 studies | 37% ± 24% | |
epithelial cell | 5 studies | 22% ± 8% | |
glutamatergic neuron | 5 studies | 48% ± 22% | |
fibroblast | 5 studies | 24% ± 7% | |
macrophage | 5 studies | 27% ± 4% | |
neuron | 4 studies | 35% ± 16% | |
endothelial cell of lymphatic vessel | 4 studies | 24% ± 3% | |
granule cell | 3 studies | 19% ± 3% | |
ciliated cell | 3 studies | 17% ± 2% | |
hepatocyte | 3 studies | 29% ± 9% | |
type I pneumocyte | 3 studies | 21% ± 5% | |
goblet cell | 3 studies | 25% ± 12% | |
adipocyte | 3 studies | 23% ± 0% | |
smooth muscle cell | 3 studies | 18% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 8 studies | 37% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1126.65 | 1445 / 1445 | 100% | 12.95 | 183 / 183 |
lung | 100% | 1329.43 | 577 / 578 | 100% | 11.31 | 1155 / 1155 |
prostate | 100% | 1430.82 | 245 / 245 | 100% | 15.56 | 501 / 502 |
breast | 100% | 1609.39 | 459 / 459 | 100% | 13.58 | 1115 / 1118 |
ovary | 100% | 1634.60 | 180 / 180 | 100% | 8.67 | 428 / 430 |
thymus | 100% | 1820.25 | 653 / 653 | 100% | 14.09 | 602 / 605 |
pancreas | 100% | 1259.95 | 328 / 328 | 99% | 8.95 | 177 / 178 |
intestine | 100% | 1313.89 | 966 / 966 | 99% | 10.98 | 524 / 527 |
brain | 100% | 870.67 | 2629 / 2642 | 100% | 8.33 | 704 / 705 |
stomach | 100% | 1253.24 | 359 / 359 | 99% | 11.57 | 284 / 286 |
uterus | 100% | 1573.43 | 170 / 170 | 99% | 8.79 | 454 / 459 |
bladder | 100% | 1492.67 | 21 / 21 | 99% | 9.17 | 498 / 504 |
kidney | 100% | 1328.73 | 89 / 89 | 99% | 12.38 | 890 / 901 |
liver | 100% | 1127.38 | 226 / 226 | 98% | 7.69 | 398 / 406 |
adrenal gland | 100% | 1992.05 | 258 / 258 | 97% | 7.45 | 224 / 230 |
skin | 100% | 1668.21 | 1808 / 1809 | 96% | 10.08 | 452 / 472 |
adipose | 100% | 1617.13 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 5.97 | 29 / 29 |
muscle | 100% | 1369.66 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1166.15 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 8.73 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.18 | 1 / 1 |
blood vessel | 100% | 1459.17 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 903.32 | 834 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 86% | 6.63 | 69 / 80 |
peripheral blood | 85% | 760.64 | 792 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000422 | Biological process | autophagy of mitochondrion |
GO_0006511 | Biological process | ubiquitin-dependent protein catabolic process |
GO_0031146 | Biological process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
GO_0016607 | Cellular component | nuclear speck |
GO_0019005 | Cellular component | SCF ubiquitin ligase complex |
GO_0000151 | Cellular component | ubiquitin ligase complex |
GO_0005758 | Cellular component | mitochondrial intermembrane space |
GO_0005829 | Cellular component | cytosol |
GO_0005515 | Molecular function | protein binding |
Gene name | FBXL4 |
Protein name | F-box/LRR-repeat protein 4 (F-box and leucine-rich repeat protein 4) (F-box protein FBL4/FBL5) |
Synonyms | FBL5 FBL4 |
Description | |
Accessions | ENST00000229971.2 Q9UKA2 ENST00000369244.7 |