Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| macrophage | 12 studies | 30% ± 14% | |
| myeloid cell | 9 studies | 25% ± 9% | |
| fibroblast | 7 studies | 24% ± 11% | |
| type I pneumocyte | 7 studies | 25% ± 6% | |
| type II pneumocyte | 7 studies | 41% ± 10% | |
| club cell | 4 studies | 32% ± 9% | |
| retina horizontal cell | 3 studies | 20% ± 2% | |
| hepatocyte | 3 studies | 57% ± 18% | |
| monocyte | 3 studies | 22% ± 6% | |
| endothelial cell | 3 studies | 25% ± 6% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| lung | 3 studies | 24% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| liver | 100% | 8112.62 | 226 / 226 | 96% | 33.99 | 390 / 406 |
| thymus | 97% | 2155.51 | 636 / 653 | 90% | 54.59 | 546 / 605 |
| lung | 100% | 3850.05 | 577 / 578 | 86% | 21.37 | 989 / 1155 |
| ovary | 97% | 2315.27 | 175 / 180 | 88% | 27.63 | 377 / 430 |
| uterus | 100% | 3390.16 | 170 / 170 | 66% | 11.39 | 304 / 459 |
| breast | 98% | 1725.49 | 452 / 459 | 66% | 7.02 | 734 / 1118 |
| kidney | 99% | 3426.09 | 88 / 89 | 56% | 8.30 | 507 / 901 |
| skin | 75% | 984.72 | 1352 / 1809 | 61% | 11.33 | 288 / 472 |
| stomach | 93% | 1695.53 | 334 / 359 | 31% | 2.56 | 89 / 286 |
| bladder | 67% | 650.90 | 14 / 21 | 37% | 5.78 | 186 / 504 |
| esophagus | 65% | 596.06 | 936 / 1445 | 37% | 3.62 | 67 / 183 |
| adipose | 99% | 2043.76 | 1186 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 98% | 1588.93 | 237 / 241 | 0% | 0 | 0 / 0 |
| pancreas | 14% | 85.78 | 47 / 328 | 74% | 8.21 | 131 / 178 |
| lymph node | 0% | 0 | 0 / 0 | 86% | 17.59 | 25 / 29 |
| intestine | 60% | 452.54 | 584 / 966 | 23% | 1.99 | 123 / 527 |
| prostate | 79% | 820.67 | 194 / 245 | 4% | 0.25 | 18 / 502 |
| tonsil | 0% | 0 | 0 / 0 | 71% | 6.52 | 32 / 45 |
| heart | 71% | 482.95 | 610 / 861 | 0% | 0 | 0 / 0 |
| adrenal gland | 57% | 436.46 | 146 / 258 | 6% | 1.46 | 14 / 230 |
| peripheral blood | 55% | 814.95 | 512 / 929 | 0% | 0 | 0 / 0 |
| blood vessel | 52% | 542.39 | 692 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 30% | 2.61 | 24 / 80 |
| muscle | 29% | 175.46 | 233 / 803 | 0% | 0 | 0 / 0 |
| brain | 3% | 24.93 | 79 / 2642 | 26% | 3.44 | 182 / 705 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0055074 | Biological process | calcium ion homeostasis |
| GO_0044691 | Biological process | tooth eruption |
| GO_0070166 | Biological process | enamel mineralization |
| GO_0006468 | Biological process | protein phosphorylation |
| GO_0001934 | Biological process | positive regulation of protein phosphorylation |
| GO_0031214 | Biological process | biomineral tissue development |
| GO_0009617 | Biological process | response to bacterium |
| GO_0005615 | Cellular component | extracellular space |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0005783 | Cellular component | endoplasmic reticulum |
| GO_0005794 | Cellular component | Golgi apparatus |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0043539 | Molecular function | protein serine/threonine kinase activator activity |
| GO_0004674 | Molecular function | protein serine/threonine kinase activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0016773 | Molecular function | phosphotransferase activity, alcohol group as acceptor |
| Gene name | FAM20A |
| Protein name | FAM20A golgi associated secretory pathway pseudokinase Family with sequence similarity 20, member A FAM20A protein Pseudokinase FAM20A |
| Synonyms | hCG_1986249 UNQ9388/PRO34279 FP2747 Fam20A |
| Description | FUNCTION: Pseudokinase that acts as an allosteric activator of the Golgi serine/threonine protein kinase FAM20C and is involved in biomineralization of teeth. Forms a complex with FAM20C and increases the ability of FAM20C to phosphorylate the proteins that form the 'matrix' that guides the deposition of the enamel minerals. . |
| Accessions | ENST00000619787.4 ENST00000590873.5 K7EIV7 Q8IYA5 Q96MK3 L8B8N7 K7EQL5 ENST00000592554.2 Q71MG5 ENST00000590074.5 |
