Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 20 studies | 44% ± 19% | |
endothelial cell | 15 studies | 29% ± 15% | |
glutamatergic neuron | 13 studies | 52% ± 26% | |
oligodendrocyte precursor cell | 13 studies | 44% ± 19% | |
oligodendrocyte | 13 studies | 38% ± 14% | |
microglial cell | 13 studies | 42% ± 15% | |
GABAergic neuron | 11 studies | 55% ± 21% | |
macrophage | 11 studies | 33% ± 13% | |
pericyte | 8 studies | 25% ± 14% | |
neuron | 7 studies | 44% ± 20% | |
interneuron | 6 studies | 66% ± 17% | |
fibroblast | 6 studies | 24% ± 5% | |
smooth muscle cell | 6 studies | 25% ± 5% | |
amacrine cell | 5 studies | 33% ± 9% | |
retinal cone cell | 5 studies | 48% ± 18% | |
retinal ganglion cell | 5 studies | 36% ± 10% | |
cardiac muscle cell | 5 studies | 28% ± 6% | |
monocyte | 5 studies | 28% ± 6% | |
epithelial cell | 4 studies | 30% ± 12% | |
granule cell | 4 studies | 44% ± 6% | |
adipocyte | 4 studies | 22% ± 6% | |
dendritic cell | 4 studies | 21% ± 2% | |
Mueller cell | 4 studies | 43% ± 8% | |
retinal rod cell | 4 studies | 37% ± 6% | |
myeloid cell | 4 studies | 31% ± 10% | |
endothelial cell of lymphatic vessel | 4 studies | 21% ± 3% | |
type I pneumocyte | 4 studies | 20% ± 4% | |
GABAergic interneuron | 3 studies | 54% ± 5% | |
progenitor cell | 3 studies | 31% ± 5% | |
GABAergic amacrine cell | 3 studies | 37% ± 6% | |
OFF-bipolar cell | 3 studies | 27% ± 8% | |
ON-bipolar cell | 3 studies | 23% ± 6% | |
glycinergic amacrine cell | 3 studies | 32% ± 5% | |
retina horizontal cell | 3 studies | 24% ± 7% | |
endothelial cell of vascular tree | 3 studies | 24% ± 7% | |
ependymal cell | 3 studies | 43% ± 16% | |
alveolar macrophage | 3 studies | 35% ± 6% | |
lymphocyte | 3 studies | 22% ± 3% | |
basal cell | 3 studies | 31% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 12270.43 | 2642 / 2642 | 100% | 161.50 | 705 / 705 |
breast | 100% | 4174.45 | 459 / 459 | 100% | 44.92 | 1116 / 1118 |
ovary | 100% | 4685.34 | 180 / 180 | 100% | 33.95 | 428 / 430 |
prostate | 100% | 3806.89 | 244 / 245 | 100% | 31.21 | 501 / 502 |
thymus | 100% | 4320.31 | 652 / 653 | 99% | 40.00 | 600 / 605 |
kidney | 100% | 2937.19 | 89 / 89 | 99% | 31.39 | 890 / 901 |
esophagus | 99% | 3870.89 | 1430 / 1445 | 99% | 26.96 | 181 / 183 |
skin | 99% | 3338.30 | 1791 / 1809 | 99% | 39.06 | 465 / 472 |
lung | 99% | 3183.84 | 571 / 578 | 98% | 25.62 | 1137 / 1155 |
intestine | 100% | 4429.78 | 965 / 966 | 97% | 18.57 | 512 / 527 |
stomach | 99% | 2879.17 | 355 / 359 | 98% | 22.47 | 280 / 286 |
uterus | 100% | 4965.71 | 170 / 170 | 97% | 25.05 | 443 / 459 |
adrenal gland | 100% | 3352.14 | 257 / 258 | 97% | 32.13 | 222 / 230 |
bladder | 100% | 4201.48 | 21 / 21 | 94% | 18.97 | 473 / 504 |
pancreas | 88% | 1659.53 | 290 / 328 | 97% | 27.31 | 173 / 178 |
liver | 95% | 1949.37 | 215 / 226 | 86% | 15.18 | 350 / 406 |
blood vessel | 100% | 5249.46 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 24.68 | 80 / 80 |
spleen | 100% | 3127.11 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.52 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.88 | 1 / 1 |
adipose | 100% | 3836.87 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 3428.58 | 798 / 803 | 0% | 0 | 0 / 0 |
heart | 93% | 2887.02 | 802 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 16.78 | 27 / 29 |
peripheral blood | 78% | 2360.76 | 720 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1905053 | Biological process | positive regulation of base-excision repair |
GO_0005515 | Molecular function | protein binding |
Gene name | FAM168A |
Protein name | Protein FAM168A (Tongue cancer chemotherapy resistance-associated protein 1) |
Synonyms | TCRP1 KIAA0280 |
Description | FUNCTION: In cancer context, protects cells from induced-DNA damage and apoptosis. Acts, at least in part, through PI3K/AKT/NFKB signaling pathway and by preventing POLB degradation. Decreases POLB ubiquitation and stabilizes its protein levels. . |
Accessions | ENST00000064778.8 [Q92567-1] ENST00000450446.6 [Q92567-3] Q92567 ENST00000356467.5 [Q92567-2] |