Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 10 studies | 26% ± 8% | |
retinal rod cell | 9 studies | 54% ± 18% | |
retinal cone cell | 6 studies | 41% ± 16% | |
retinal pigment epithelial cell | 3 studies | 35% ± 9% | |
GABAergic neuron | 3 studies | 25% ± 5% | |
glutamatergic neuron | 3 studies | 34% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 484.44 | 2639 / 2642 | 100% | 7.07 | 703 / 705 |
thymus | 100% | 661.34 | 653 / 653 | 98% | 5.40 | 594 / 605 |
ovary | 100% | 865.75 | 180 / 180 | 96% | 5.00 | 414 / 430 |
uterus | 100% | 428.46 | 170 / 170 | 95% | 5.43 | 435 / 459 |
kidney | 100% | 346.04 | 89 / 89 | 95% | 4.09 | 852 / 901 |
pancreas | 99% | 381.91 | 326 / 328 | 94% | 2.62 | 167 / 178 |
skin | 96% | 236.44 | 1742 / 1809 | 96% | 6.25 | 454 / 472 |
esophagus | 98% | 213.02 | 1414 / 1445 | 94% | 3.82 | 172 / 183 |
lung | 94% | 234.76 | 543 / 578 | 98% | 4.58 | 1127 / 1155 |
breast | 99% | 258.37 | 453 / 459 | 92% | 3.41 | 1034 / 1118 |
prostate | 98% | 280.13 | 241 / 245 | 92% | 2.61 | 463 / 502 |
stomach | 100% | 568.19 | 359 / 359 | 86% | 2.27 | 246 / 286 |
bladder | 100% | 285.52 | 21 / 21 | 85% | 2.87 | 428 / 504 |
adrenal gland | 94% | 162.00 | 242 / 258 | 88% | 3.88 | 202 / 230 |
intestine | 97% | 238.70 | 938 / 966 | 81% | 2.11 | 426 / 527 |
liver | 63% | 76.53 | 143 / 226 | 52% | 1.25 | 210 / 406 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.17 | 1 / 1 |
blood vessel | 100% | 333.72 | 1331 / 1335 | 0% | 0 | 0 / 0 |
adipose | 98% | 227.78 | 1181 / 1204 | 0% | 0 | 0 / 0 |
spleen | 96% | 157.48 | 231 / 241 | 0% | 0 | 0 / 0 |
muscle | 95% | 193.78 | 761 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 5.27 | 73 / 80 |
tonsil | 0% | 0 | 0 / 0 | 91% | 4.18 | 41 / 45 |
heart | 80% | 133.06 | 688 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 76% | 2.23 | 22 / 29 |
peripheral blood | 19% | 162.29 | 177 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0007601 | Biological process | visual perception |
GO_1901985 | Biological process | positive regulation of protein acetylation |
GO_0044782 | Biological process | cilium organization |
GO_0005813 | Cellular component | centrosome |
GO_0097431 | Cellular component | mitotic spindle pole |
GO_0000235 | Cellular component | astral microtubule |
GO_0005876 | Cellular component | spindle microtubule |
GO_0005929 | Cellular component | cilium |
GO_0036064 | Cellular component | ciliary basal body |
GO_0032391 | Cellular component | photoreceptor connecting cilium |
GO_0001917 | Cellular component | photoreceptor inner segment |
GO_0072686 | Cellular component | mitotic spindle |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0008017 | Molecular function | microtubule binding |
Gene name | FAM161A |
Protein name | FAM161 centrosomal protein A Protein FAM161A |
Synonyms | |
Description | FUNCTION: Involved in ciliogenesis. . FUNCTION: Involved in ciliogenesis. . |
Accessions | Q3B820 F8WCZ8 F8W731 ENST00000405894.3 [Q3B820-1] ENST00000418113.5 ENST00000456262.5 H7C4C9 ENST00000404929.6 [Q3B820-3] ENST00000307507.3 |