Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 15 studies | 34% ± 13% | |
oligodendrocyte | 15 studies | 39% ± 19% | |
endothelial cell | 13 studies | 27% ± 12% | |
endothelial cell of lymphatic vessel | 12 studies | 34% ± 15% | |
astrocyte | 11 studies | 32% ± 15% | |
macrophage | 10 studies | 26% ± 8% | |
epithelial cell | 9 studies | 38% ± 18% | |
adipocyte | 9 studies | 40% ± 13% | |
oligodendrocyte precursor cell | 8 studies | 28% ± 13% | |
type II pneumocyte | 8 studies | 35% ± 15% | |
fibroblast | 8 studies | 32% ± 17% | |
basal cell | 7 studies | 31% ± 18% | |
type I pneumocyte | 7 studies | 25% ± 9% | |
myeloid cell | 6 studies | 21% ± 5% | |
retinal cone cell | 6 studies | 26% ± 8% | |
microglial cell | 5 studies | 21% ± 4% | |
epithelial cell of proximal tubule | 5 studies | 25% ± 11% | |
cardiac muscle cell | 5 studies | 29% ± 5% | |
lymphocyte | 5 studies | 21% ± 7% | |
Mueller cell | 5 studies | 36% ± 12% | |
respiratory goblet cell | 5 studies | 30% ± 15% | |
club cell | 5 studies | 32% ± 12% | |
retinal pigment epithelial cell | 4 studies | 48% ± 27% | |
retinal rod cell | 4 studies | 33% ± 12% | |
goblet cell | 4 studies | 29% ± 15% | |
secretory cell | 3 studies | 19% ± 2% | |
GABAergic neuron | 3 studies | 23% ± 8% | |
abnormal cell | 3 studies | 34% ± 12% | |
hepatocyte | 3 studies | 49% ± 12% | |
T cell | 3 studies | 20% ± 6% | |
alveolar macrophage | 3 studies | 29% ± 14% | |
pericyte | 3 studies | 23% ± 10% | |
transit amplifying cell | 3 studies | 44% ± 28% | |
smooth muscle cell | 3 studies | 19% ± 3% | |
kidney loop of Henle epithelial cell | 3 studies | 23% ± 6% | |
mucus secreting cell | 3 studies | 28% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 5686.47 | 245 / 245 | 100% | 16.29 | 501 / 502 |
thymus | 100% | 7148.21 | 653 / 653 | 99% | 14.43 | 598 / 605 |
esophagus | 100% | 3260.24 | 1444 / 1445 | 99% | 11.00 | 181 / 183 |
breast | 100% | 3754.29 | 459 / 459 | 98% | 11.08 | 1100 / 1118 |
bladder | 100% | 3254.05 | 21 / 21 | 98% | 11.02 | 493 / 504 |
kidney | 100% | 5483.42 | 89 / 89 | 97% | 17.30 | 876 / 901 |
liver | 100% | 4148.92 | 226 / 226 | 97% | 10.04 | 394 / 406 |
stomach | 100% | 3074.24 | 359 / 359 | 97% | 8.40 | 277 / 286 |
lung | 99% | 3107.51 | 575 / 578 | 97% | 10.94 | 1123 / 1155 |
intestine | 100% | 3360.01 | 965 / 966 | 96% | 9.41 | 506 / 527 |
pancreas | 100% | 2771.66 | 328 / 328 | 96% | 9.53 | 170 / 178 |
uterus | 99% | 3336.06 | 169 / 170 | 95% | 10.87 | 435 / 459 |
skin | 100% | 2732.28 | 1808 / 1809 | 93% | 8.49 | 438 / 472 |
adrenal gland | 100% | 5258.77 | 258 / 258 | 92% | 7.50 | 211 / 230 |
ovary | 100% | 4130.35 | 180 / 180 | 87% | 7.22 | 376 / 430 |
brain | 79% | 1191.25 | 2097 / 2642 | 53% | 3.24 | 371 / 705 |
adipose | 100% | 2461.57 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 3547.09 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 9.34 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.43 | 1 / 1 |
blood vessel | 98% | 1805.44 | 1314 / 1335 | 0% | 0 | 0 / 0 |
heart | 95% | 2167.51 | 819 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 90% | 10.65 | 72 / 80 |
muscle | 83% | 1001.24 | 663 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 72% | 4.92 | 21 / 29 |
peripheral blood | 32% | 797.82 | 300 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016052 | Biological process | carbohydrate catabolic process |
GO_0009063 | Biological process | amino acid catabolic process |
GO_0005575 | Cellular component | cellular_component |
GO_0005739 | Cellular component | mitochondrion |
GO_0016853 | Molecular function | isomerase activity |
GO_0016836 | Molecular function | hydro-lyase activity |
GO_0050023 | Molecular function | L-fuconate dehydratase activity |
GO_0000287 | Molecular function | magnesium ion binding |
Gene name | ENOSF1 |
Protein name | Enolase superfamily member 1 L-fuconate dehydratase (EC 4.2.1.68) Mitochondrial enolase superfamily member 1 (EC 4.2.1.68) (Antisense RNA to thymidylate synthase) (rTS) (L-fuconate dehydratase) |
Synonyms | RTS TYMSAS |
Description | FUNCTION: Plays a role in the catabolism of L-fucose, a sugar that is part of the carbohydrates that are attached to cellular glycoproteins. Catalyzes the dehydration of L-fuconate to 2-keto-3-deoxy-L-fuconate by the abstraction of the 2-proton to generate an enediolate intermediate that is stabilized by the magnesium ion . . |
Accessions | R4GNF8 J3QL81 J3QL99 J3QSB6 Q7L5Y1 ENST00000585128.6 A0A3F2YNX7 ENST00000580982.5 X6RM24 ENST00000647584.2 [Q7L5Y1-1] ENST00000583771.1 ENST00000383578.7 [Q7L5Y1-2] ENST00000581475.5 ENST00000584453.5 ENST00000340116.12 |