Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 6 studies | 34% ± 16% | |
platelet | 5 studies | 22% ± 4% | |
glomerular endothelial cell | 4 studies | 72% ± 7% | |
GABAergic neuron | 4 studies | 24% ± 9% | |
endothelial cell | 3 studies | 30% ± 16% | |
glutamatergic neuron | 3 studies | 44% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 26% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 4790.88 | 2636 / 2642 | 100% | 47.46 | 704 / 705 |
prostate | 96% | 1332.20 | 236 / 245 | 96% | 13.75 | 483 / 502 |
lung | 97% | 1321.42 | 561 / 578 | 92% | 13.43 | 1057 / 1155 |
kidney | 100% | 3561.99 | 89 / 89 | 85% | 18.11 | 765 / 901 |
bladder | 95% | 1433.90 | 20 / 21 | 86% | 15.25 | 432 / 504 |
adrenal gland | 98% | 1952.43 | 252 / 258 | 80% | 34.40 | 184 / 230 |
uterus | 92% | 897.59 | 156 / 170 | 82% | 12.31 | 375 / 459 |
esophagus | 79% | 3473.62 | 1135 / 1445 | 86% | 17.58 | 158 / 183 |
breast | 66% | 707.41 | 303 / 459 | 95% | 14.04 | 1063 / 1118 |
thymus | 82% | 757.21 | 538 / 653 | 77% | 6.41 | 465 / 605 |
ovary | 49% | 345.39 | 89 / 180 | 95% | 13.79 | 407 / 430 |
skin | 66% | 1018.52 | 1197 / 1809 | 77% | 20.31 | 365 / 472 |
intestine | 62% | 516.44 | 598 / 966 | 55% | 7.01 | 289 / 527 |
stomach | 33% | 253.58 | 119 / 359 | 69% | 7.23 | 197 / 286 |
spleen | 100% | 1685.46 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 17.99 | 1 / 1 |
blood vessel | 98% | 3401.09 | 1312 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 2% | 15.26 | 8 / 328 | 94% | 12.74 | 168 / 178 |
lymph node | 0% | 0 | 0 / 0 | 97% | 66.63 | 28 / 29 |
tonsil | 0% | 0 | 0 / 0 | 96% | 16.74 | 43 / 45 |
heart | 92% | 1532.15 | 793 / 861 | 0% | 0 | 0 / 0 |
liver | 56% | 693.40 | 126 / 226 | 30% | 2.53 | 122 / 406 |
eye | 0% | 0 | 0 / 0 | 80% | 12.32 | 64 / 80 |
adipose | 44% | 329.71 | 528 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 29% | 228.69 | 274 / 929 | 0% | 0 | 0 / 0 |
muscle | 9% | 75.33 | 76 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0051260 | Biological process | protein homooligomerization |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_0006897 | Biological process | endocytosis |
GO_0034498 | Biological process | early endosome to Golgi transport |
GO_0032456 | Biological process | endocytic recycling |
GO_1903358 | Biological process | regulation of Golgi organization |
GO_0090160 | Biological process | Golgi to lysosome transport |
GO_0015031 | Biological process | protein transport |
GO_1903779 | Biological process | regulation of cardiac conduction |
GO_0086036 | Biological process | regulation of cardiac muscle cell membrane potential |
GO_0055117 | Biological process | regulation of cardiac muscle contraction |
GO_0001881 | Biological process | receptor recycling |
GO_0005886 | Cellular component | plasma membrane |
GO_0030139 | Cellular component | endocytic vesicle |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005769 | Cellular component | early endosome |
GO_0055038 | Cellular component | recycling endosome membrane |
GO_0005925 | Cellular component | focal adhesion |
GO_0020018 | Cellular component | ciliary pocket membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0010008 | Cellular component | endosome membrane |
GO_0005634 | Cellular component | nucleus |
GO_0003676 | Molecular function | nucleic acid binding |
GO_0005525 | Molecular function | GTP binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | EHD3 |
Protein name | EH domain-containing protein 3 (PAST homolog 3) |
Synonyms | EHD2 PAST3 |
Description | FUNCTION: ATP- and membrane-binding protein that controls membrane reorganization/tubulation upon ATP hydrolysis . In vitro causes tubulation of endocytic membranes . Binding to phosphatidic acid induces its membrane tubulation activity (By similarity). Plays a role in endocytic transport. Involved in early endosome to recycling endosome compartment (ERC), retrograde early endosome to Golgi, and endosome to plasma membrane (rapid recycling) protein transport. Involved in the regulation of Golgi maintenance and morphology . Involved in the recycling of internalized D1 dopamine receptor . Plays a role in cardiac protein trafficking probably implicating ANK2 . Involved in the ventricular membrane targeting of SLC8A1 and CACNA1C and probably the atrial membrane localization of CACNA1GG and CACNA1H implicated in the regulation of atrial myocyte excitability and cardiac conduction (By similarity). In conjunction with EHD4 may be involved in endocytic trafficking of KDR/VEGFR2 implicated in control of glomerular function (By similarity). Involved in the rapid recycling of integrin beta-3 implicated in cell adhesion maintenance . Involved in the unidirectional retrograde dendritic transport of endocytosed BACE1 and in efficient sorting of BACE1 to axons implicating a function in neuronal APP processing (By similarity). Plays a role in the formation of the ciliary vesicle, an early step in cilium biogenesis; possibly sharing redundant functions with EHD1 . . |
Accessions | ENST00000322054.10 [Q9NZN3-1] Q9NZN3 |