Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 12 studies | 29% ± 15% | |
oligodendrocyte precursor cell | 11 studies | 38% ± 18% | |
glutamatergic neuron | 9 studies | 42% ± 27% | |
GABAergic neuron | 8 studies | 43% ± 25% | |
ciliated cell | 6 studies | 24% ± 7% | |
interneuron | 6 studies | 44% ± 26% | |
neuron | 4 studies | 26% ± 4% | |
endothelial cell | 4 studies | 31% ± 14% | |
GABAergic interneuron | 3 studies | 32% ± 4% | |
granule cell | 3 studies | 20% ± 2% | |
fibroblast | 3 studies | 22% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 10 studies | 33% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 4467.67 | 2639 / 2642 | 100% | 20.20 | 702 / 705 |
pancreas | 100% | 2009.72 | 328 / 328 | 92% | 9.51 | 163 / 178 |
kidney | 100% | 2699.13 | 89 / 89 | 88% | 13.86 | 794 / 901 |
ovary | 100% | 4703.92 | 180 / 180 | 85% | 6.62 | 367 / 430 |
lung | 98% | 1351.17 | 569 / 578 | 78% | 4.95 | 898 / 1155 |
prostate | 99% | 2071.18 | 243 / 245 | 76% | 3.54 | 384 / 502 |
uterus | 99% | 3986.31 | 169 / 170 | 76% | 8.38 | 349 / 459 |
breast | 97% | 1322.16 | 446 / 459 | 78% | 4.60 | 868 / 1118 |
adrenal gland | 76% | 674.07 | 195 / 258 | 82% | 21.17 | 189 / 230 |
bladder | 100% | 2196.62 | 21 / 21 | 58% | 3.57 | 290 / 504 |
esophagus | 86% | 1635.52 | 1249 / 1445 | 64% | 5.98 | 118 / 183 |
thymus | 82% | 677.82 | 538 / 653 | 43% | 2.23 | 259 / 605 |
intestine | 84% | 1994.05 | 814 / 966 | 29% | 1.47 | 155 / 527 |
skin | 58% | 1217.70 | 1045 / 1809 | 56% | 6.49 | 262 / 472 |
stomach | 58% | 1075.21 | 207 / 359 | 43% | 2.20 | 124 / 286 |
blood vessel | 100% | 1895.00 | 1333 / 1335 | 0% | 0 | 0 / 0 |
adipose | 97% | 1350.02 | 1173 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 5.18 | 37 / 45 |
heart | 68% | 627.61 | 586 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 44% | 2.23 | 35 / 80 |
spleen | 32% | 229.94 | 78 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 31% | 1.34 | 9 / 29 |
liver | 4% | 25.48 | 9 / 226 | 21% | 2.21 | 84 / 406 |
muscle | 5% | 37.98 | 43 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 12.05 | 11 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0060271 | Biological process | cilium assembly |
GO_0061512 | Biological process | protein localization to cilium |
GO_0007224 | Biological process | smoothened signaling pathway |
GO_0007283 | Biological process | spermatogenesis |
GO_0007507 | Biological process | heart development |
GO_0045184 | Biological process | establishment of protein localization |
GO_0032053 | Biological process | ciliary basal body organization |
GO_0051649 | Biological process | establishment of localization in cell |
GO_0140706 | Biological process | protein-containing complex localization to centriolar satellite |
GO_0051220 | Biological process | cytoplasmic sequestering of protein |
GO_0120316 | Biological process | sperm flagellum assembly |
GO_0007281 | Biological process | germ cell development |
GO_0045724 | Biological process | positive regulation of cilium assembly |
GO_1903566 | Biological process | positive regulation of protein localization to cilium |
GO_0032507 | Biological process | maintenance of protein location in cell |
GO_0097539 | Cellular component | ciliary transition fiber |
GO_0034451 | Cellular component | centriolar satellite |
GO_0016607 | Cellular component | nuclear speck |
GO_0005813 | Cellular component | centrosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005814 | Cellular component | centriole |
GO_0005737 | Cellular component | cytoplasm |
GO_0097546 | Cellular component | ciliary base |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0036064 | Cellular component | ciliary basal body |
GO_0005634 | Cellular component | nucleus |
GO_0060090 | Molecular function | molecular adaptor activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0062063 | Molecular function | BBSome binding |
Gene name | DZIP1 |
Protein name | DZIP1 protein Cilium assembly protein DZIP1 (DAZ-interacting protein 1/2) (DAZ-interacting zinc finger protein 1) |
Synonyms | KIAA0996 DZIP DZIP2 |
Description | FUNCTION: Molecular adapter that recruits protein complexes required for cilium assembly and function to the cilium basal body . At the exit of mitosis, localizes to the basal body and ciliary base of the forming primary cilium where it recruits and activates RAB8A to direct vesicle-mediated transport of proteins to the cilium (By similarity). Also recruits the BBSome, a complex involved in cilium biogenesis, by bridging it to PCM1 at the centriolar satellites of the cilium . It is also required for the recruitment to the cilium basal body of the intraflagellar transport (IFT) machinery as well as the ciliary appendage proteins CEP164 and NINEIN (By similarity). Functions as a regulator of Hedgehog signaling both through its role in cilium assembly but also probably through its ability to retain GLI3 within the cytoplasm (By similarity). It is involved in spermatogenesis through its role in organization of the basal body and assembly of the sperm flagellum . Also indirectly involved in heart development through its function in ciliogenesis . . |
Accessions | ENST00000361396.6 [Q86YF9-2] Q86YF9 ENST00000466569.1 [Q86YF9-3] ENST00000361156.7 [Q86YF9-2] ENST00000347108.7 [Q86YF9-1] ENST00000376829.7 [Q86YF9-1] Q05D25 |