Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 21 studies | 30% ± 13% | |
endothelial cell of lymphatic vessel | 12 studies | 33% ± 16% | |
classical monocyte | 10 studies | 21% ± 5% | |
oligodendrocyte | 9 studies | 35% ± 14% | |
capillary endothelial cell | 7 studies | 20% ± 6% | |
cardiac muscle cell | 5 studies | 29% ± 7% | |
vein endothelial cell | 4 studies | 22% ± 4% | |
endothelial cell of vascular tree | 4 studies | 27% ± 11% | |
glomerular endothelial cell | 3 studies | 25% ± 1% | |
macrophage | 3 studies | 17% ± 2% | |
GABAergic neuron | 3 studies | 37% ± 18% | |
glutamatergic neuron | 3 studies | 58% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 38% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 3554.10 | 650 / 653 | 97% | 23.36 | 588 / 605 |
breast | 96% | 3085.61 | 442 / 459 | 96% | 12.65 | 1069 / 1118 |
liver | 97% | 3149.90 | 219 / 226 | 93% | 14.51 | 376 / 406 |
lung | 100% | 6368.15 | 577 / 578 | 89% | 12.86 | 1028 / 1155 |
kidney | 98% | 2359.31 | 87 / 89 | 83% | 42.95 | 749 / 901 |
bladder | 95% | 4609.43 | 20 / 21 | 76% | 8.87 | 381 / 504 |
intestine | 85% | 3295.82 | 824 / 966 | 78% | 8.06 | 412 / 527 |
esophagus | 75% | 3011.00 | 1088 / 1445 | 88% | 11.24 | 161 / 183 |
prostate | 84% | 2109.53 | 206 / 245 | 70% | 6.04 | 350 / 502 |
adrenal gland | 62% | 980.91 | 159 / 258 | 87% | 14.13 | 201 / 230 |
uterus | 81% | 1718.15 | 138 / 170 | 65% | 8.96 | 300 / 459 |
stomach | 53% | 1286.14 | 189 / 359 | 84% | 10.98 | 239 / 286 |
brain | 68% | 1580.77 | 1792 / 2642 | 68% | 6.70 | 480 / 705 |
skin | 24% | 367.44 | 443 / 1809 | 84% | 11.80 | 396 / 472 |
muscle | 100% | 13590.87 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 15393.60 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 4278.15 | 1199 / 1204 | 0% | 0 | 0 / 0 |
heart | 99% | 5483.58 | 849 / 861 | 0% | 0 | 0 / 0 |
ovary | 37% | 654.35 | 67 / 180 | 61% | 4.97 | 262 / 430 |
pancreas | 5% | 63.48 | 16 / 328 | 89% | 10.55 | 159 / 178 |
lymph node | 0% | 0 | 0 / 0 | 90% | 13.31 | 26 / 29 |
blood vessel | 88% | 2387.01 | 1173 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 81% | 37557.82 | 755 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 67% | 6.61 | 30 / 45 |
eye | 0% | 0 | 0 / 0 | 49% | 9.18 | 39 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0046928 | Biological process | regulation of neurotransmitter secretion |
GO_0002280 | Biological process | monocyte activation involved in immune response |
GO_0050765 | Biological process | negative regulation of phagocytosis |
GO_0002281 | Biological process | macrophage activation involved in immune response |
GO_0005886 | Cellular component | plasma membrane |
GO_0034451 | Cellular component | centriolar satellite |
GO_0030139 | Cellular component | endocytic vesicle |
GO_0005769 | Cellular component | early endosome |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0042383 | Cellular component | sarcolemma |
GO_0070062 | Cellular component | extracellular exosome |
GO_0030315 | Cellular component | T-tubule |
GO_0005770 | Cellular component | late endosome |
GO_0005768 | Cellular component | endosome |
GO_0030659 | Cellular component | cytoplasmic vesicle membrane |
GO_0005544 | Molecular function | calcium-dependent phospholipid binding |
GO_0005543 | Molecular function | phospholipid binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | DYSF |
Protein name | Dysferlin (Dystrophy-associated fer-1-like protein) (Fer-1-like protein 1) Minidysferlin Dysferlin |
Synonyms | FER1L1 |
Description | FUNCTION: Key calcium ion sensor involved in the Ca(2+)-triggered synaptic vesicle-plasma membrane fusion. Plays a role in the sarcolemma repair mechanism of both skeletal muscle and cardiomyocytes that permits rapid resealing of membranes disrupted by mechanical stress (By similarity). . |
Accessions | ENST00000394120.6 [O75923-14] ENST00000479049.6 A0A8V8TMV5 ENST00000698057.1 ENST00000409762.5 [O75923-5] A0A8V8TN49 ENST00000475076.5 E5KVZ4 ENST00000698058.1 ENST00000409366.5 [O75923-10] ENST00000409651.5 [O75923-8] ENST00000410020.8 [O75923-13] ENST00000413539.6 [O75923-2] ENST00000698059.1 A0A8V8TLV7 Q7Z6P1 ENST00000258104.8 [O75923-1] B7Z2R1 O75923 ENST00000409744.5 [O75923-12] ENST00000410041.1 [O75923-11] A0A8V8TLD2 ENST00000429174.6 [O75923-4] ENST00000409582.7 [O75923-7] |