Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 10 studies | 28% ± 14% | |
astrocyte | 10 studies | 26% ± 11% | |
microglial cell | 9 studies | 29% ± 9% | |
adipocyte | 9 studies | 26% ± 9% | |
endothelial cell | 8 studies | 27% ± 9% | |
myeloid cell | 8 studies | 23% ± 5% | |
plasmacytoid dendritic cell | 6 studies | 21% ± 4% | |
type I pneumocyte | 6 studies | 23% ± 8% | |
oligodendrocyte | 6 studies | 27% ± 6% | |
oligodendrocyte precursor cell | 6 studies | 31% ± 10% | |
classical monocyte | 5 studies | 20% ± 4% | |
dendritic cell | 5 studies | 22% ± 9% | |
GABAergic neuron | 5 studies | 38% ± 17% | |
interneuron | 5 studies | 33% ± 20% | |
neuron | 4 studies | 28% ± 11% | |
epithelial cell | 4 studies | 38% ± 7% | |
type II pneumocyte | 4 studies | 19% ± 5% | |
glutamatergic neuron | 4 studies | 52% ± 19% | |
monocyte | 4 studies | 22% ± 4% | |
fibroblast | 4 studies | 24% ± 10% | |
hematopoietic precursor cell | 3 studies | 19% ± 2% | |
non-classical monocyte | 3 studies | 18% ± 4% | |
ciliated cell | 3 studies | 25% ± 4% | |
abnormal cell | 3 studies | 33% ± 6% | |
alveolar macrophage | 3 studies | 25% ± 7% | |
goblet cell | 3 studies | 30% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 4378.17 | 2642 / 2642 | 100% | 88.06 | 705 / 705 |
esophagus | 100% | 3353.44 | 1445 / 1445 | 100% | 38.84 | 183 / 183 |
lung | 100% | 3640.45 | 578 / 578 | 100% | 36.11 | 1155 / 1155 |
prostate | 100% | 3752.62 | 245 / 245 | 100% | 53.95 | 502 / 502 |
breast | 100% | 3853.25 | 459 / 459 | 100% | 59.97 | 1116 / 1118 |
bladder | 100% | 3881.76 | 21 / 21 | 100% | 31.98 | 503 / 504 |
thymus | 100% | 3380.21 | 653 / 653 | 100% | 43.83 | 603 / 605 |
adrenal gland | 100% | 5212.54 | 258 / 258 | 100% | 56.41 | 229 / 230 |
uterus | 100% | 3676.41 | 170 / 170 | 100% | 33.55 | 457 / 459 |
ovary | 100% | 4843.54 | 180 / 180 | 100% | 29.14 | 428 / 430 |
pancreas | 100% | 2831.89 | 328 / 328 | 99% | 31.11 | 177 / 178 |
intestine | 100% | 3203.02 | 966 / 966 | 99% | 34.17 | 524 / 527 |
stomach | 100% | 2967.52 | 359 / 359 | 99% | 33.67 | 284 / 286 |
kidney | 100% | 2319.87 | 89 / 89 | 99% | 39.71 | 893 / 901 |
liver | 100% | 1805.31 | 226 / 226 | 99% | 23.76 | 402 / 406 |
skin | 100% | 4022.87 | 1809 / 1809 | 96% | 41.44 | 455 / 472 |
adipose | 100% | 3861.08 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3646.83 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 19.56 | 29 / 29 |
muscle | 100% | 5293.44 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2668.80 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 33.66 | 45 / 45 |
heart | 97% | 2484.45 | 837 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 95% | 2186.73 | 885 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 31.44 | 75 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005813 | Cellular component | centrosome |
GO_0000776 | Cellular component | kinetochore |
GO_0001725 | Cellular component | stress fiber |
GO_0005869 | Cellular component | dynactin complex |
GO_0030017 | Cellular component | sarcomere |
GO_0005829 | Cellular component | cytosol |
GO_0005868 | Cellular component | cytoplasmic dynein complex |
GO_0005938 | Cellular component | cell cortex |
GO_0005925 | Cellular component | focal adhesion |
GO_0000922 | Cellular component | spindle pole |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | DCTN4 |
Protein name | Dynactin subunit 4 Dynactin subunit 4 (Dyn4) (Dynactin subunit p62) Dynactin 4 isoform 3 |
Synonyms | |
Description | FUNCTION: Part of the dynactin complex that activates the molecular motor dynein for ultra-processive transport along microtubules. . |
Accessions | ENST00000627368.2 H9KVE0 A0A0S2Z5D5 ENST00000447998.7 [Q9UJW0-1] E5RGG1 ENST00000521533.1 ENST00000424236.5 [Q9UJW0-2] ENST00000521448.5 E5RK21 Q9UJW0 ENST00000518015.5 A0A0S2Z5B8 A0A0S2Z5D4 ENST00000446090.6 [Q9UJW0-3] ENST00000521728.5 E5RI97 ENST00000517421.1 |