Name | Number of supported studies | Average coverage | |
---|---|---|---|
amacrine cell | 5 studies | 45% ± 13% | |
OFF-bipolar cell | 4 studies | 34% ± 17% | |
ON-bipolar cell | 4 studies | 31% ± 17% | |
retinal ganglion cell | 4 studies | 39% ± 24% | |
epithelial cell | 4 studies | 20% ± 2% | |
retina horizontal cell | 4 studies | 45% ± 15% | |
retinal bipolar neuron | 3 studies | 52% ± 8% | |
GABAergic amacrine cell | 3 studies | 30% ± 11% | |
glycinergic amacrine cell | 3 studies | 28% ± 9% | |
retinal cone cell | 3 studies | 40% ± 7% | |
Mueller cell | 3 studies | 32% ± 10% | |
rod bipolar cell | 3 studies | 40% ± 18% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
eye | 6 studies | 29% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 99% | 1607.33 | 646 / 653 | 100% | 32.04 | 604 / 605 |
brain | 99% | 2272.41 | 2625 / 2642 | 99% | 11.75 | 698 / 705 |
ovary | 98% | 1647.94 | 177 / 180 | 100% | 16.46 | 430 / 430 |
adrenal gland | 98% | 2433.69 | 253 / 258 | 98% | 32.14 | 226 / 230 |
uterus | 86% | 797.54 | 147 / 170 | 91% | 9.78 | 417 / 459 |
prostate | 83% | 870.24 | 204 / 245 | 93% | 7.74 | 469 / 502 |
kidney | 82% | 730.43 | 73 / 89 | 91% | 8.67 | 821 / 901 |
skin | 75% | 1877.66 | 1365 / 1809 | 93% | 8.34 | 440 / 472 |
stomach | 87% | 603.90 | 312 / 359 | 80% | 5.76 | 230 / 286 |
breast | 75% | 685.24 | 345 / 459 | 89% | 8.08 | 996 / 1118 |
esophagus | 77% | 757.58 | 1112 / 1445 | 85% | 6.99 | 155 / 183 |
intestine | 83% | 735.45 | 806 / 966 | 73% | 4.40 | 385 / 527 |
lung | 63% | 444.51 | 366 / 578 | 88% | 6.83 | 1012 / 1155 |
pancreas | 60% | 290.54 | 198 / 328 | 87% | 7.01 | 155 / 178 |
bladder | 71% | 453.81 | 15 / 21 | 72% | 4.98 | 365 / 504 |
liver | 57% | 530.54 | 129 / 226 | 86% | 7.88 | 350 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 20.74 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 9.03 | 29 / 29 |
spleen | 100% | 945.05 | 240 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 13.72 | 41 / 45 |
peripheral blood | 67% | 381.00 | 622 / 929 | 0% | 0 | 0 / 0 |
adipose | 64% | 550.78 | 771 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 56% | 412.42 | 752 / 1335 | 0% | 0 | 0 / 0 |
muscle | 50% | 374.37 | 399 / 803 | 0% | 0 | 0 / 0 |
heart | 49% | 328.74 | 426 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048511 | Biological process | rhythmic process |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0090575 | Cellular component | RNA polymerase II transcription regulator complex |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | DBP |
Protein name | D-box binding PAR bZIP transcription factor D site-binding protein (Albumin D box-binding protein) (Albumin D-element-binding protein) (Tax-responsive enhancer element-binding protein 302) (TaxREB302) |
Synonyms | |
Description | FUNCTION: This transcriptional activator recognizes and binds to the sequence 5'-RTTAYGTAAY-3' found in the promoter of genes such as albumin, CYP2A4 and CYP2A5. It is not essential for circadian rhythm generation, but modulates important clock output genes. May be a direct target for regulation by the circadian pacemaker component clock. May affect circadian period and sleep regulation. |
Accessions | ENST00000222122.10 M0QXP1 ENST00000601104.1 ENST00000599385.5 Q10586 M0QXW3 ENST00000593500.1 |