Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 13 studies | 37% ± 15% | |
ciliated cell | 10 studies | 26% ± 11% | |
astrocyte | 8 studies | 25% ± 11% | |
oligodendrocyte precursor cell | 7 studies | 28% ± 13% | |
endothelial cell | 6 studies | 25% ± 7% | |
microglial cell | 5 studies | 24% ± 6% | |
basal cell | 5 studies | 20% ± 2% | |
endothelial cell of lymphatic vessel | 5 studies | 23% ± 4% | |
macrophage | 5 studies | 28% ± 4% | |
type I pneumocyte | 5 studies | 21% ± 5% | |
epithelial cell | 4 studies | 32% ± 5% | |
retinal cone cell | 4 studies | 24% ± 4% | |
cardiac muscle cell | 4 studies | 20% ± 2% | |
retinal rod cell | 3 studies | 32% ± 7% | |
GABAergic neuron | 3 studies | 32% ± 14% | |
glutamatergic neuron | 3 studies | 32% ± 17% | |
pericyte | 3 studies | 19% ± 3% | |
smooth muscle cell | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2636.21 | 2635 / 2642 | 100% | 58.63 | 704 / 705 |
thymus | 100% | 3238.09 | 652 / 653 | 98% | 26.13 | 595 / 605 |
prostate | 100% | 4514.56 | 245 / 245 | 98% | 27.14 | 492 / 502 |
pancreas | 98% | 1838.18 | 323 / 328 | 99% | 33.48 | 177 / 178 |
kidney | 100% | 3714.22 | 89 / 89 | 97% | 23.62 | 874 / 901 |
lung | 100% | 3038.24 | 577 / 578 | 97% | 31.26 | 1117 / 1155 |
uterus | 100% | 3882.56 | 170 / 170 | 96% | 39.74 | 442 / 459 |
breast | 100% | 2768.30 | 459 / 459 | 96% | 36.92 | 1075 / 1118 |
skin | 99% | 1941.11 | 1788 / 1809 | 97% | 24.85 | 457 / 472 |
intestine | 100% | 4351.54 | 963 / 966 | 95% | 19.63 | 500 / 527 |
esophagus | 100% | 5134.48 | 1444 / 1445 | 94% | 21.53 | 172 / 183 |
ovary | 94% | 1360.88 | 170 / 180 | 99% | 34.58 | 427 / 430 |
bladder | 100% | 4911.48 | 21 / 21 | 90% | 21.87 | 454 / 504 |
stomach | 100% | 3079.41 | 359 / 359 | 90% | 19.07 | 256 / 286 |
adrenal gland | 100% | 3338.29 | 258 / 258 | 83% | 14.87 | 192 / 230 |
liver | 40% | 334.24 | 91 / 226 | 61% | 11.68 | 247 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 26.42 | 80 / 80 |
muscle | 100% | 5077.35 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1843.66 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 26.10 | 45 / 45 |
blood vessel | 100% | 3561.84 | 1333 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 2837.97 | 1202 / 1204 | 0% | 0 | 0 / 0 |
heart | 100% | 3343.39 | 859 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 52% | 633.45 | 480 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 31% | 4.90 | 9 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0043130 | Molecular function | ubiquitin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CUEDC1 |
Protein name | CUE domain containing 1 Alternative protein CUEDC1 CUE domain-containing protein 1 |
Synonyms | |
Description | |
Accessions | J3KT42 ENST00000577840.5 ENST00000360238.6 [Q9NWM3-1] J3KRK6 ENST00000581898.5 ENST00000577589.1 J3QLQ8 ENST00000407144.6 [Q9NWM3-1] ENST00000577830.6 [Q9NWM3-1] ENST00000585294.5 Q9NWM3 J3KRV3 L0R845 |