Name | Number of supported studies | Average coverage | |
---|---|---|---|
hepatocyte | 4 studies | 70% ± 19% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
liver | 3 studies | 39% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 570437.39 | 226 / 226 | 95% | 2875.73 | 384 / 406 |
pancreas | 97% | 8078.16 | 319 / 328 | 73% | 242.97 | 130 / 178 |
kidney | 69% | 37.15 | 61 / 89 | 9% | 11.71 | 82 / 901 |
breast | 75% | 72.37 | 343 / 459 | 0% | 6.24 | 5 / 1118 |
lung | 72% | 47.03 | 414 / 578 | 2% | 0.97 | 25 / 1155 |
bladder | 67% | 44.10 | 14 / 21 | 4% | 0.42 | 18 / 504 |
prostate | 67% | 62.31 | 165 / 245 | 3% | 0.19 | 13 / 502 |
adrenal gland | 69% | 67.77 | 179 / 258 | 0% | 0 | 0 / 230 |
spleen | 69% | 769.42 | 167 / 241 | 0% | 0 | 0 / 0 |
uterus | 65% | 39.82 | 111 / 170 | 3% | 0.20 | 13 / 459 |
adipose | 63% | 81.35 | 755 / 1204 | 0% | 0 | 0 / 0 |
esophagus | 56% | 58.83 | 816 / 1445 | 3% | 22.14 | 6 / 183 |
stomach | 57% | 34.80 | 203 / 359 | 2% | 1.04 | 5 / 286 |
thymus | 57% | 34.32 | 371 / 653 | 0% | 0.01 | 2 / 605 |
ovary | 56% | 39.00 | 100 / 180 | 0% | 0 | 0 / 430 |
intestine | 46% | 35.74 | 440 / 966 | 5% | 35.93 | 24 / 527 |
skin | 45% | 44.24 | 813 / 1809 | 2% | 0.27 | 11 / 472 |
blood vessel | 42% | 25.44 | 566 / 1335 | 0% | 0 | 0 / 0 |
heart | 41% | 30.26 | 352 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 40% | 211.10 | 374 / 929 | 0% | 0 | 0 / 0 |
muscle | 33% | 17.45 | 261 / 803 | 0% | 0 | 0 / 0 |
brain | 31% | 14.13 | 831 / 2642 | 0% | 0.03 | 2 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006953 | Biological process | acute-phase response |
GO_0006954 | Biological process | inflammatory response |
GO_0045087 | Biological process | innate immune response |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0032677 | Biological process | regulation of interleukin-8 production |
GO_0010745 | Biological process | negative regulation of macrophage derived foam cell differentiation |
GO_0050830 | Biological process | defense response to Gram-positive bacterium |
GO_0008228 | Biological process | opsonization |
GO_0032930 | Biological process | positive regulation of superoxide anion generation |
GO_0010888 | Biological process | negative regulation of lipid storage |
GO_0042310 | Biological process | vasoconstriction |
GO_0032945 | Biological process | negative regulation of mononuclear cell proliferation |
GO_0005615 | Cellular component | extracellular space |
GO_0005576 | Cellular component | extracellular region |
GO_0033265 | Molecular function | choline binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0050750 | Molecular function | low-density lipoprotein particle receptor binding |
GO_0030169 | Molecular function | low-density lipoprotein particle binding |
GO_0001849 | Molecular function | complement component C1q complex binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0046790 | Molecular function | virion binding |
Gene name | CRP |
Protein name | C-reactive protein C-reactive protein [Cleaved into: C-reactive protein(1-205)] |
Synonyms | PTX1 |
Description | FUNCTION: Displays several functions associated with host defense: it promotes agglutination, bacterial capsular swelling, phagocytosis and complement fixation through its calcium-dependent binding to phosphorylcholine. Can interact with DNA and histones and may scavenge nuclear material released from damaged circulating cells. FUNCTION: Displays several functions associated with host defense: it promotes agglutination, bacterial capsular swelling, phagocytosis and complement fixation through its calcium-dependent binding to phosphorylcholine. Can interact with DNA and histones and may scavenge nuclear material released from damaged circulating cells. . FUNCTION: Displays several functions associated with host defense: it promotes agglutination, bacterial capsular swelling, phagocytosis and complement fixation through its calcium-dependent binding to phosphorylcholine. Can interact with DNA and histones and may scavenge nuclear material released from damaged circulating cells. . |
Accessions | ENST00000368112.5 [P02741-2] C9JRE9 ENST00000437342.1 ENST00000368110.1 ENST00000255030.9 [P02741-1] P02741 ENST00000368111.5 Q5VVP7 |