Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 35 studies | 36% ± 14% | |
endothelial cell of lymphatic vessel | 12 studies | 35% ± 20% | |
macrophage | 10 studies | 35% ± 14% | |
capillary endothelial cell | 9 studies | 24% ± 8% | |
endothelial cell of artery | 9 studies | 25% ± 6% | |
endothelial cell of vascular tree | 9 studies | 31% ± 21% | |
astrocyte | 9 studies | 38% ± 18% | |
myeloid cell | 7 studies | 27% ± 11% | |
vein endothelial cell | 7 studies | 32% ± 23% | |
GABAergic neuron | 6 studies | 29% ± 15% | |
fibroblast | 6 studies | 27% ± 6% | |
glutamatergic neuron | 6 studies | 52% ± 21% | |
ciliated cell | 5 studies | 24% ± 7% | |
monocyte | 5 studies | 27% ± 7% | |
neuron | 4 studies | 28% ± 11% | |
pericyte | 4 studies | 23% ± 5% | |
dendritic cell | 4 studies | 22% ± 2% | |
mast cell | 4 studies | 20% ± 4% | |
Mueller cell | 4 studies | 37% ± 10% | |
classical monocyte | 3 studies | 17% ± 1% | |
oligodendrocyte precursor cell | 3 studies | 28% ± 11% | |
epithelial cell | 3 studies | 25% ± 1% | |
hepatocyte | 3 studies | 58% ± 27% | |
retinal pigment epithelial cell | 3 studies | 32% ± 19% | |
connective tissue cell | 3 studies | 20% ± 5% | |
alveolar macrophage | 3 studies | 36% ± 9% | |
basal cell | 3 studies | 30% ± 5% | |
interneuron | 3 studies | 41% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 1130.33 | 258 / 258 | 93% | 13.70 | 213 / 230 |
kidney | 100% | 1045.46 | 89 / 89 | 92% | 19.76 | 827 / 901 |
lung | 100% | 1808.56 | 578 / 578 | 91% | 14.28 | 1048 / 1155 |
esophagus | 99% | 941.12 | 1437 / 1445 | 87% | 12.84 | 160 / 183 |
thymus | 100% | 1259.53 | 653 / 653 | 87% | 6.94 | 525 / 605 |
liver | 100% | 1150.05 | 226 / 226 | 82% | 6.77 | 332 / 406 |
skin | 100% | 827.85 | 1807 / 1809 | 79% | 11.50 | 375 / 472 |
uterus | 100% | 1044.65 | 170 / 170 | 75% | 9.08 | 342 / 459 |
pancreas | 77% | 293.29 | 252 / 328 | 91% | 10.65 | 162 / 178 |
breast | 100% | 1785.14 | 459 / 459 | 68% | 4.91 | 756 / 1118 |
intestine | 100% | 956.83 | 966 / 966 | 51% | 3.77 | 268 / 527 |
bladder | 100% | 1061.67 | 21 / 21 | 47% | 5.23 | 238 / 504 |
prostate | 97% | 677.76 | 238 / 245 | 45% | 2.30 | 224 / 502 |
stomach | 90% | 490.79 | 324 / 359 | 49% | 3.49 | 139 / 286 |
brain | 91% | 743.66 | 2416 / 2642 | 40% | 3.97 | 279 / 705 |
ovary | 100% | 756.41 | 180 / 180 | 28% | 1.53 | 122 / 430 |
adipose | 100% | 2084.77 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1279.11 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1409.98 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.05 | 1 / 1 |
heart | 98% | 1039.57 | 848 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 9.22 | 37 / 45 |
eye | 0% | 0 | 0 / 0 | 74% | 7.93 | 59 / 80 |
muscle | 62% | 268.33 | 496 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 57% | 467.55 | 531 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 55% | 3.79 | 16 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008150 | Biological process | biological_process |
GO_0071277 | Biological process | cellular response to calcium ion |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005886 | Cellular component | plasma membrane |
GO_0005544 | Molecular function | calcium-dependent phospholipid binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | CPNE8 |
Protein name | Copine-8 (Copine VIII) Copine 8 |
Synonyms | |
Description | FUNCTION: Probable calcium-dependent phospholipid-binding protein that may play a role in calcium-mediated intracellular processes. . |
Accessions | ENST00000538596.6 [Q86YQ8-2] E7ENV7 ENST00000550863.1 ENST00000331366.10 [Q86YQ8-1] F8VZB5 Q86YQ8 ENST00000360449.3 |