Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasma cell | 8 studies | 27% ± 9% | |
ciliated cell | 7 studies | 23% ± 7% | |
epithelial cell | 7 studies | 29% ± 13% | |
plasmacytoid dendritic cell | 7 studies | 23% ± 6% | |
goblet cell | 5 studies | 33% ± 10% | |
plasmablast | 4 studies | 39% ± 20% | |
fibroblast | 4 studies | 26% ± 7% | |
abnormal cell | 4 studies | 21% ± 3% | |
endothelial cell | 3 studies | 21% ± 4% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 17% ± 1% | |
macrophage | 3 studies | 18% ± 3% | |
GABAergic neuron | 3 studies | 26% ± 5% | |
glutamatergic neuron | 3 studies | 32% ± 7% | |
dendritic cell | 3 studies | 24% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 8217.44 | 459 / 459 | 100% | 242.85 | 1118 / 1118 |
lung | 100% | 8843.83 | 578 / 578 | 100% | 208.51 | 1155 / 1155 |
ovary | 100% | 7360.97 | 180 / 180 | 100% | 168.37 | 430 / 430 |
pancreas | 100% | 7854.88 | 328 / 328 | 100% | 171.77 | 178 / 178 |
prostate | 100% | 9504.62 | 245 / 245 | 100% | 359.76 | 502 / 502 |
skin | 100% | 10247.97 | 1809 / 1809 | 100% | 281.01 | 472 / 472 |
stomach | 100% | 8031.84 | 359 / 359 | 100% | 182.95 | 286 / 286 |
esophagus | 100% | 6041.97 | 1444 / 1445 | 100% | 203.70 | 183 / 183 |
uterus | 100% | 7820.08 | 170 / 170 | 100% | 190.55 | 458 / 459 |
liver | 100% | 6877.24 | 226 / 226 | 100% | 128.69 | 405 / 406 |
kidney | 100% | 6433.30 | 89 / 89 | 100% | 142.57 | 898 / 901 |
intestine | 100% | 7602.82 | 966 / 966 | 100% | 187.36 | 525 / 527 |
bladder | 100% | 6585.14 | 21 / 21 | 100% | 180.74 | 502 / 504 |
thymus | 100% | 8909.03 | 653 / 653 | 100% | 168.52 | 602 / 605 |
adrenal gland | 100% | 10106.51 | 258 / 258 | 99% | 126.57 | 228 / 230 |
brain | 98% | 5029.74 | 2582 / 2642 | 100% | 114.95 | 704 / 705 |
adipose | 100% | 8046.34 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 155.85 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 116.74 | 29 / 29 |
spleen | 100% | 7376.63 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 187.31 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 88.77 | 1 / 1 |
blood vessel | 100% | 7869.02 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 4437.01 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 5717.24 | 842 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 5897.39 | 899 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0072384 | Biological process | organelle transport along microtubule |
GO_0051683 | Biological process | establishment of Golgi localization |
GO_0006886 | Biological process | intracellular protein transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0006891 | Biological process | intra-Golgi vesicle-mediated transport |
GO_0009306 | Biological process | protein secretion |
GO_0000139 | Cellular component | Golgi membrane |
GO_0030126 | Cellular component | COPI vesicle coat |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005793 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0030133 | Cellular component | transport vesicle |
GO_0005198 | Molecular function | structural molecule activity |
GO_0005515 | Molecular function | protein binding |
Gene name | COPG1 |
Protein name | COPI coat complex subunit gamma 1 Coatomer subunit gamma-1 (Gamma-1-coat protein) (Gamma-1-COP) |
Synonyms | COPG |
Description | FUNCTION: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. Required for limiting lipid storage in lipid droplets. Involved in lipid homeostasis by regulating the presence of perilipin family members PLIN2 and PLIN3 at the lipid droplet surface and promoting the association of adipocyte triglyceride lipase (PNPLA2) with the lipid droplet surface to mediate lipolysis (By similarity). . |
Accessions | ENST00000314797.10 ENST00000504350.1 ENST00000514478.1 H0Y8G2 D6RG17 H0Y8X7 Q9Y678 ENST00000509889.5 |