Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 24% ± 8% | |
endothelial cell of lymphatic vessel | 11 studies | 25% ± 10% | |
dendritic cell | 10 studies | 39% ± 14% | |
conventional dendritic cell | 8 studies | 24% ± 5% | |
endothelial cell of vascular tree | 8 studies | 25% ± 5% | |
vein endothelial cell | 7 studies | 25% ± 10% | |
macrophage | 6 studies | 26% ± 10% | |
type I pneumocyte | 4 studies | 23% ± 6% | |
capillary endothelial cell | 4 studies | 18% ± 1% |
Insufficient scRNA-seq data for expression of CLIC2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 2897.46 | 653 / 653 | 100% | 56.92 | 604 / 605 |
lung | 100% | 3074.55 | 578 / 578 | 92% | 29.80 | 1063 / 1155 |
breast | 100% | 2048.55 | 459 / 459 | 92% | 15.58 | 1023 / 1118 |
uterus | 100% | 1576.31 | 170 / 170 | 70% | 16.26 | 321 / 459 |
kidney | 91% | 519.92 | 81 / 89 | 76% | 16.97 | 685 / 901 |
esophagus | 93% | 846.99 | 1338 / 1445 | 73% | 10.59 | 134 / 183 |
bladder | 100% | 1048.05 | 21 / 21 | 63% | 9.38 | 315 / 504 |
adrenal gland | 94% | 501.73 | 243 / 258 | 64% | 8.70 | 147 / 230 |
intestine | 99% | 1016.39 | 958 / 966 | 53% | 6.29 | 280 / 527 |
prostate | 91% | 534.89 | 222 / 245 | 57% | 4.82 | 285 / 502 |
ovary | 99% | 1378.22 | 179 / 180 | 44% | 3.77 | 188 / 430 |
stomach | 77% | 500.16 | 275 / 359 | 64% | 8.21 | 184 / 286 |
skin | 78% | 530.46 | 1415 / 1809 | 60% | 13.04 | 285 / 472 |
brain | 68% | 294.03 | 1788 / 2642 | 62% | 6.26 | 435 / 705 |
pancreas | 24% | 88.66 | 79 / 328 | 91% | 16.37 | 162 / 178 |
adipose | 100% | 2417.07 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 32.48 | 29 / 29 |
spleen | 100% | 2904.20 | 241 / 241 | 0% | 0 | 0 / 0 |
heart | 97% | 817.27 | 834 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 94% | 846.94 | 1259 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 20.61 | 37 / 45 |
liver | 19% | 71.32 | 43 / 226 | 42% | 5.17 | 170 / 406 |
muscle | 49% | 204.05 | 390 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 45% | 326.35 | 416 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 20% | 3.80 | 16 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0060315 | Biological process | negative regulation of ryanodine-sensitive calcium-release channel activity |
GO_0098869 | Biological process | cellular oxidant detoxification |
GO_0006821 | Biological process | chloride transport |
GO_0007165 | Biological process | signal transduction |
GO_0051099 | Biological process | positive regulation of binding |
GO_0010881 | Biological process | regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion |
GO_1902476 | Biological process | chloride transmembrane transport |
GO_0010880 | Biological process | regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0034707 | Cellular component | chloride channel complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0004602 | Molecular function | glutathione peroxidase activity |
GO_0004364 | Molecular function | glutathione transferase activity |
GO_0005515 | Molecular function | protein binding |
GO_0005254 | Molecular function | chloride channel activity |
Gene name | CLIC2 |
Protein name | Chloride intracellular channel 2 isoform b Chloride intracellular channel 2 Chloride intracellular channel protein 2 (XAP121) |
Synonyms | RP13-228J13.7-004 |
Description | FUNCTION: Can insert into membranes and form chloride ion channels. Channel activity depends on the pH. Membrane insertion seems to be redox-regulated and may occur only under oxydizing conditions. Modulates the activity of RYR2 and inhibits calcium influx. . |
Accessions | O15247 ENST00000321926.4 Q86YM0 ENST00000369449.7 A6PVS0 |