Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 29 studies | 36% ± 14% | |
connective tissue cell | 13 studies | 40% ± 18% | |
pericyte | 13 studies | 33% ± 10% | |
myofibroblast cell | 10 studies | 34% ± 9% | |
smooth muscle cell | 4 studies | 26% ± 8% | |
adventitial cell | 4 studies | 22% ± 7% | |
hematopoietic precursor cell | 3 studies | 27% ± 6% | |
conventional dendritic cell | 3 studies | 27% ± 9% | |
progenitor cell | 3 studies | 50% ± 6% | |
common myeloid progenitor | 3 studies | 54% ± 8% | |
hematopoietic stem cell | 3 studies | 36% ± 7% | |
granulocyte monocyte progenitor cell | 3 studies | 46% ± 28% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 38% ± 20% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
intestine | 4 studies | 26% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 1938.11 | 180 / 180 | 100% | 104.79 | 428 / 430 |
prostate | 100% | 1484.33 | 245 / 245 | 97% | 29.32 | 488 / 502 |
adrenal gland | 100% | 1047.28 | 258 / 258 | 96% | 43.70 | 220 / 230 |
skin | 100% | 2361.69 | 1809 / 1809 | 94% | 109.27 | 446 / 472 |
thymus | 100% | 866.22 | 652 / 653 | 93% | 25.97 | 565 / 605 |
breast | 100% | 945.21 | 458 / 459 | 92% | 43.05 | 1031 / 1118 |
lung | 99% | 943.63 | 573 / 578 | 90% | 25.33 | 1039 / 1155 |
intestine | 99% | 718.32 | 957 / 966 | 88% | 27.39 | 465 / 527 |
uterus | 100% | 2076.15 | 170 / 170 | 86% | 32.88 | 396 / 459 |
brain | 99% | 579.56 | 2603 / 2642 | 87% | 19.13 | 614 / 705 |
bladder | 100% | 1258.24 | 21 / 21 | 84% | 31.08 | 421 / 504 |
kidney | 99% | 1202.13 | 88 / 89 | 81% | 19.65 | 733 / 901 |
esophagus | 98% | 602.12 | 1411 / 1445 | 81% | 21.43 | 148 / 183 |
pancreas | 74% | 241.09 | 242 / 328 | 95% | 72.17 | 169 / 178 |
stomach | 80% | 386.15 | 286 / 359 | 88% | 27.44 | 252 / 286 |
liver | 86% | 386.56 | 195 / 226 | 49% | 14.85 | 197 / 406 |
ureter | 0% | 0 | 0 / 0 | 100% | 18.94 | 1 / 1 |
spleen | 100% | 874.65 | 240 / 241 | 0% | 0 | 0 / 0 |
adipose | 98% | 858.93 | 1185 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 97% | 763.90 | 1291 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 18.94 | 26 / 29 |
heart | 89% | 559.98 | 764 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 76% | 19.16 | 34 / 45 |
eye | 0% | 0 | 0 / 0 | 69% | 36.55 | 55 / 80 |
peripheral blood | 57% | 350.41 | 531 / 929 | 0% | 0 | 0 / 0 |
muscle | 23% | 62.85 | 182 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0008284 | Biological process | positive regulation of cell population proliferation |
GO_0001503 | Biological process | ossification |
GO_0005615 | Cellular component | extracellular space |
GO_0005576 | Cellular component | extracellular region |
GO_0005737 | Cellular component | cytoplasm |
GO_0030246 | Molecular function | carbohydrate binding |
GO_0005515 | Molecular function | protein binding |
GO_0008083 | Molecular function | growth factor activity |
Gene name | CLEC11A |
Protein name | C-type lectin domain family 11, member A, isoform CRA_c (SCGF-beta) C-type lectin domain family 11 member A (C-type lectin superfamily member 3) (Lymphocyte secreted C-type lectin) (Osteolectin) (Stem cell growth factor) (p47) C-type lectin domain containing 11A |
Synonyms | LSLCL SCGF CLECSF3 hCG_22930 |
Description | FUNCTION: Promotes osteogenesis by stimulating the differentiation of mesenchymal progenitors into mature osteoblasts . Important for repair and maintenance of adult bone (By similarity). . |
Accessions | V9H0X6 ENST00000599973.1 M0R081 Q9Y240 ENST00000250340.9 |