Name | Number of supported studies | Average coverage | |
---|---|---|---|
B cell | 11 studies | 19% ± 2% | |
oligodendrocyte | 10 studies | 29% ± 11% | |
endothelial cell | 8 studies | 25% ± 6% | |
naive B cell | 8 studies | 19% ± 2% | |
memory B cell | 7 studies | 21% ± 3% | |
adipocyte | 7 studies | 21% ± 4% | |
microglial cell | 6 studies | 23% ± 8% | |
plasmacytoid dendritic cell | 6 studies | 26% ± 8% | |
glutamatergic neuron | 5 studies | 38% ± 22% | |
epithelial cell | 5 studies | 30% ± 11% | |
astrocyte | 5 studies | 30% ± 11% | |
macrophage | 5 studies | 25% ± 7% | |
classical monocyte | 4 studies | 21% ± 4% | |
oligodendrocyte precursor cell | 4 studies | 28% ± 9% | |
dendritic cell | 4 studies | 27% ± 10% | |
goblet cell | 4 studies | 27% ± 12% | |
non-classical monocyte | 3 studies | 23% ± 4% | |
GABAergic neuron | 3 studies | 42% ± 17% | |
endothelial cell of lymphatic vessel | 3 studies | 18% ± 3% | |
fibroblast | 3 studies | 19% ± 2% | |
monocyte | 3 studies | 21% ± 2% | |
transit amplifying cell | 3 studies | 29% ± 19% | |
neuron | 3 studies | 29% ± 17% | |
abnormal cell | 3 studies | 26% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4289.98 | 1445 / 1445 | 100% | 24.29 | 183 / 183 |
ovary | 100% | 6408.47 | 180 / 180 | 100% | 27.14 | 430 / 430 |
pancreas | 100% | 3323.14 | 328 / 328 | 100% | 28.98 | 178 / 178 |
uterus | 100% | 5921.63 | 170 / 170 | 100% | 34.39 | 459 / 459 |
thymus | 100% | 6327.57 | 653 / 653 | 100% | 27.96 | 604 / 605 |
intestine | 100% | 5164.65 | 966 / 966 | 100% | 23.91 | 526 / 527 |
skin | 100% | 4657.89 | 1809 / 1809 | 100% | 25.36 | 471 / 472 |
stomach | 100% | 4200.52 | 359 / 359 | 100% | 21.65 | 285 / 286 |
prostate | 100% | 6407.62 | 245 / 245 | 100% | 28.63 | 500 / 502 |
liver | 100% | 3577.54 | 226 / 226 | 100% | 19.09 | 404 / 406 |
brain | 99% | 3334.09 | 2622 / 2642 | 100% | 27.82 | 705 / 705 |
bladder | 100% | 4941.00 | 21 / 21 | 99% | 30.81 | 500 / 504 |
lung | 100% | 4744.30 | 578 / 578 | 99% | 24.01 | 1139 / 1155 |
breast | 100% | 5426.12 | 459 / 459 | 98% | 22.76 | 1101 / 1118 |
adrenal gland | 100% | 3790.66 | 258 / 258 | 98% | 24.17 | 226 / 230 |
kidney | 100% | 3767.11 | 89 / 89 | 98% | 18.59 | 883 / 901 |
adipose | 100% | 4353.76 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 29.02 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 37.99 | 29 / 29 |
spleen | 100% | 7119.74 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 25.06 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 31.50 | 1 / 1 |
blood vessel | 100% | 4200.38 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2924.51 | 799 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 3749.94 | 919 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 2374.29 | 844 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008380 | Biological process | RNA splicing |
GO_0006397 | Biological process | mRNA processing |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | CLASRP |
Protein name | CLK4 associating serine/arginine rich protein CLK4-associating serine/arginine rich protein (Splicing factor, arginine/serine-rich 16) (Suppressor of white-apricot homolog 2) CLK4 associating serine/arginine rich protein (Splicing factor, arginine/serine-rich 16 (Suppressor-of-white-apricot homolog, Drosophila), isoform CRA_b) |
Synonyms | UNQ2428/PRO4988 hCG_22138 SWAP2 SFRS16 |
Description | FUNCTION: Probably functions as an alternative splicing regulator. May regulate the mRNA splicing of genes such as CLK1. May act by regulating members of the CLK kinase family (By similarity). . |
Accessions | ENST00000587112.1 ENST00000591410.5 ENST00000544944.6 K7EP11 ENST00000391953.8 [Q8N2M8-4] F5H0Q6 ENST00000391952.7 [Q8N2M8-3] K7EM61 K7EKC9 Q8N2M8 ENST00000591904.1 ENST00000588936.5 K7EKR8 ENST00000221455.8 [Q8N2M8-1] |