Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1478.06 | 1445 / 1445 | 100% | 27.77 | 183 / 183 |
kidney | 100% | 2068.83 | 89 / 89 | 100% | 52.54 | 901 / 901 |
stomach | 100% | 897.01 | 359 / 359 | 100% | 32.10 | 286 / 286 |
intestine | 100% | 1532.03 | 966 / 966 | 100% | 34.89 | 526 / 527 |
ovary | 100% | 725.01 | 180 / 180 | 100% | 28.18 | 429 / 430 |
brain | 100% | 2051.60 | 2632 / 2642 | 100% | 38.52 | 705 / 705 |
uterus | 99% | 705.25 | 169 / 170 | 100% | 35.52 | 458 / 459 |
liver | 100% | 905.38 | 225 / 226 | 100% | 29.36 | 404 / 406 |
thymus | 99% | 947.06 | 649 / 653 | 100% | 23.89 | 602 / 605 |
prostate | 100% | 811.26 | 244 / 245 | 99% | 22.33 | 497 / 502 |
bladder | 100% | 1426.81 | 21 / 21 | 98% | 27.96 | 496 / 504 |
breast | 99% | 709.79 | 456 / 459 | 99% | 25.58 | 1103 / 1118 |
adrenal gland | 100% | 1424.04 | 257 / 258 | 98% | 40.37 | 226 / 230 |
skin | 99% | 922.51 | 1791 / 1809 | 98% | 22.19 | 464 / 472 |
lung | 97% | 757.38 | 561 / 578 | 100% | 28.50 | 1155 / 1155 |
pancreas | 81% | 368.09 | 266 / 328 | 99% | 24.53 | 177 / 178 |
lymph node | 0% | 0 | 0 / 0 | 100% | 32.12 | 29 / 29 |
muscle | 100% | 2855.78 | 803 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 33.75 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.57 | 1 / 1 |
adipose | 100% | 845.63 | 1201 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 986.54 | 1327 / 1335 | 0% | 0 | 0 / 0 |
spleen | 98% | 682.81 | 237 / 241 | 0% | 0 | 0 / 0 |
heart | 96% | 2994.75 | 827 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 12.57 | 73 / 80 |
peripheral blood | 29% | 376.72 | 271 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010506 | Biological process | regulation of autophagy |
GO_0106034 | Biological process | protein maturation by [2Fe-2S] cluster transfer |
GO_0043457 | Biological process | regulation of cellular respiration |
GO_0005741 | Cellular component | mitochondrial outer membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0051537 | Molecular function | 2 iron, 2 sulfur cluster binding |
GO_0047801 | Molecular function | L-cysteine transaminase activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0030170 | Molecular function | pyridoxal phosphate binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | CISD1 |
Protein name | CDGSH iron-sulfur domain-containing protein 1 (Cysteine transaminase CISD1) (EC 2.6.1.3) (MitoNEET) |
Synonyms | MDS029 ZCD1 C10orf70 |
Description | FUNCTION: L-cysteine transaminase that catalyzes the reversible transfer of the amino group from L-cysteine to the alpha-keto acid 2-oxoglutarate to respectively form 2-oxo-3-sulfanylpropanoate and L-glutamate . The catalytic cycle occurs in the presence of pyridoxal 5'-phosphate (PLP) cofactor that facilitates transamination by initially forming an internal aldimine with the epsilon-amino group of active site Lys-55 residue on the enzyme (PLP-enzyme aldimine), subsequently displaced by formation of an external aldimine with the substrate amino group (PLP-L-cysteine aldimine). The external aldimine is further deprotonated to form a carbanion intermediate, which in the presence of 2-oxoglutarate regenerates PLP yielding final products 2-oxo-3-sulfanylpropanoate and L-glutamate. The proton transfer in carbanion intermediate is suggested to be controlled by the active site lysine residue, whereas PLP stabilizes carbanion structure through electron delocalization, also known as the electron sink effect . Plays a key role in regulating maximal capacity for electron transport and oxidative phosphorylation (By similarity). May be involved in iron-sulfur cluster shuttling and/or in redox reactions. Can transfer the [2Fe-2S] cluster to an apo-acceptor protein only when in the oxidation state, likely serving as a redox sensor that regulates mitochondrial iron-sulfur cluster assembly and iron trafficking upon oxidative stress . . |
Accessions | ENST00000333926.6 Q9NZ45 |