Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 20 studies | 59% ± 22% | |
deuterosomal cell | 4 studies | 19% ± 1% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 200.87 | 650 / 653 | 99% | 7.65 | 601 / 605 |
brain | 100% | 263.43 | 2634 / 2642 | 99% | 6.10 | 698 / 705 |
prostate | 98% | 100.42 | 240 / 245 | 96% | 2.75 | 480 / 502 |
kidney | 99% | 155.16 | 88 / 89 | 93% | 5.70 | 836 / 901 |
ovary | 95% | 78.50 | 171 / 180 | 94% | 5.14 | 406 / 430 |
adrenal gland | 97% | 118.16 | 251 / 258 | 89% | 2.94 | 205 / 230 |
uterus | 92% | 114.74 | 156 / 170 | 86% | 3.73 | 394 / 459 |
lung | 89% | 249.06 | 512 / 578 | 88% | 4.94 | 1018 / 1155 |
breast | 81% | 63.51 | 373 / 459 | 95% | 5.91 | 1067 / 1118 |
bladder | 100% | 65.00 | 21 / 21 | 76% | 3.03 | 384 / 504 |
pancreas | 93% | 62.10 | 305 / 328 | 83% | 2.40 | 147 / 178 |
esophagus | 79% | 39.73 | 1138 / 1445 | 64% | 2.33 | 117 / 183 |
skin | 90% | 55.47 | 1636 / 1809 | 51% | 1.11 | 241 / 472 |
stomach | 81% | 38.45 | 291 / 359 | 41% | 0.68 | 118 / 286 |
intestine | 80% | 43.21 | 777 / 966 | 37% | 0.73 | 196 / 527 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.33 | 1 / 1 |
muscle | 99% | 128.46 | 796 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 84% | 2.74 | 38 / 45 |
spleen | 81% | 41.73 | 195 / 241 | 0% | 0 | 0 / 0 |
liver | 38% | 17.31 | 87 / 226 | 39% | 0.96 | 158 / 406 |
blood vessel | 77% | 38.67 | 1032 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 72% | 1.13 | 21 / 29 |
adipose | 70% | 34.07 | 841 / 1204 | 0% | 0 | 0 / 0 |
heart | 38% | 17.66 | 325 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 38% | 0.68 | 30 / 80 |
peripheral blood | 13% | 5.41 | 123 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0003341 | Biological process | cilium movement |
GO_0120316 | Biological process | sperm flagellum assembly |
GO_1905198 | Biological process | manchette assembly |
GO_0007368 | Biological process | determination of left/right symmetry |
GO_0060287 | Biological process | epithelial cilium movement involved in determination of left/right asymmetry |
GO_0005814 | Cellular component | centriole |
GO_0005930 | Cellular component | axoneme |
GO_0005575 | Cellular component | cellular_component |
GO_0005879 | Cellular component | axonemal microtubule |
GO_0036126 | Cellular component | sperm flagellum |
GO_0002177 | Cellular component | manchette |
GO_0005576 | Cellular component | extracellular region |
GO_0035869 | Cellular component | ciliary transition zone |
GO_0034451 | Cellular component | centriolar satellite |
GO_0000922 | Cellular component | spindle pole |
GO_0005515 | Molecular function | protein binding |
Gene name | CFAP53 |
Protein name | Cilia- and flagella-associated protein 53 (Coiled-coil domain-containing protein 11) |
Synonyms | CCDC11 |
Description | FUNCTION: Microtubule inner protein (MIP) part of the dynein-decorated doublet microtubules (DMTs) in cilia axoneme, which is required for motile cilia beating . May play a role in the beating of primary cilia and thereby be involved in the establishment of organ laterality during embryogenesis . . |
Accessions | ENST00000398545.5 Q96M91 |