Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 18 studies | 44% ± 16% | |
endothelial cell | 14 studies | 22% ± 6% | |
fibroblast | 11 studies | 21% ± 7% | |
pericyte | 11 studies | 19% ± 3% | |
endothelial cell of artery | 8 studies | 26% ± 6% | |
smooth muscle cell | 8 studies | 22% ± 3% | |
astrocyte | 6 studies | 26% ± 7% | |
retinal rod cell | 6 studies | 28% ± 9% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 5 studies | 18% ± 2% | |
epithelial cell | 5 studies | 38% ± 15% | |
deuterosomal cell | 4 studies | 32% ± 1% | |
CD4-positive, alpha-beta T cell | 4 studies | 18% ± 3% | |
neuron | 4 studies | 27% ± 11% | |
abnormal cell | 4 studies | 27% ± 8% | |
Mueller cell | 4 studies | 28% ± 6% | |
basal cell | 4 studies | 24% ± 9% | |
glutamatergic neuron | 4 studies | 56% ± 23% | |
pancreatic A cell | 3 studies | 30% ± 10% | |
kidney loop of Henle epithelial cell | 3 studies | 18% ± 3% | |
myofibroblast cell | 3 studies | 19% ± 4% | |
retina horizontal cell | 3 studies | 23% ± 6% | |
erythroblast | 3 studies | 18% ± 1% | |
endothelial cell of vascular tree | 3 studies | 20% ± 1% | |
GABAergic neuron | 3 studies | 53% ± 4% | |
connective tissue cell | 3 studies | 22% ± 6% | |
interneuron | 3 studies | 41% ± 21% | |
secretory cell | 3 studies | 23% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 2658.41 | 245 / 245 | 100% | 67.25 | 502 / 502 |
thymus | 100% | 3549.21 | 653 / 653 | 100% | 86.96 | 605 / 605 |
brain | 100% | 3933.01 | 2641 / 2642 | 100% | 75.99 | 705 / 705 |
uterus | 100% | 3073.55 | 170 / 170 | 100% | 46.13 | 458 / 459 |
ovary | 100% | 3383.41 | 180 / 180 | 100% | 50.47 | 429 / 430 |
breast | 100% | 2514.10 | 459 / 459 | 100% | 55.56 | 1115 / 1118 |
lung | 99% | 2141.34 | 575 / 578 | 100% | 41.46 | 1155 / 1155 |
adrenal gland | 100% | 2198.26 | 258 / 258 | 99% | 78.52 | 228 / 230 |
bladder | 100% | 2480.24 | 21 / 21 | 99% | 36.50 | 497 / 504 |
intestine | 100% | 2308.68 | 966 / 966 | 97% | 31.89 | 511 / 527 |
pancreas | 97% | 1155.44 | 318 / 328 | 100% | 46.96 | 178 / 178 |
esophagus | 100% | 2263.33 | 1439 / 1445 | 97% | 27.81 | 177 / 183 |
stomach | 100% | 2047.95 | 359 / 359 | 96% | 29.56 | 274 / 286 |
kidney | 100% | 2739.85 | 89 / 89 | 94% | 66.85 | 846 / 901 |
skin | 98% | 1387.51 | 1768 / 1809 | 88% | 30.54 | 416 / 472 |
liver | 40% | 301.87 | 90 / 226 | 64% | 14.46 | 261 / 406 |
adipose | 100% | 2290.94 | 1204 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 31.50 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.14 | 1 / 1 |
blood vessel | 100% | 2764.18 | 1334 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1095.27 | 240 / 241 | 0% | 0 | 0 / 0 |
heart | 97% | 1325.86 | 832 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 21.24 | 27 / 29 |
eye | 0% | 0 | 0 / 0 | 71% | 22.20 | 57 / 80 |
muscle | 71% | 568.15 | 569 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 24% | 414.37 | 225 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008150 | Biological process | biological_process |
GO_0005930 | Cellular component | axoneme |
GO_0031514 | Cellular component | motile cilium |
GO_0035869 | Cellular component | ciliary transition zone |
GO_0097546 | Cellular component | ciliary base |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | CFAP36 |
Protein name | Cilia- and flagella-associated protein 36 (Coiled-coil domain-containing protein 104) |
Synonyms | CCDC104 UNQ163/PRO189 |
Description | FUNCTION: May act as an effector for ARL3. |
Accessions | ENST00000406691.7 Q96G28 ENST00000403007.4 B5MCA1 ENST00000349456.9 [Q96G28-1] B5MD16 ENST00000407816.7 ENST00000339012.7 [Q96G28-2] B5MC35 |