CEP85L report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	19 studies	27% ± 12%	Explore
astrocyte	19 studies	47% ± 23%	Explore
glutamatergic neuron	13 studies	40% ± 24%	Explore
oligodendrocyte precursor cell	13 studies	43% ± 19%	Explore
microglial cell	13 studies	31% ± 12%	Explore
T cell	12 studies	27% ± 11%	Explore
oligodendrocyte	11 studies	36% ± 14%	Explore
fibroblast	9 studies	25% ± 12%	Explore
GABAergic neuron	8 studies	49% ± 20%	Explore
pericyte	8 studies	24% ± 11%	Explore
natural killer cell	7 studies	27% ± 9%	Explore
endothelial cell of lymphatic vessel	7 studies	41% ± 13%	Explore
CD4-positive, alpha-beta T cell	7 studies	27% ± 7%	Explore
CD8-positive, alpha-beta T cell	7 studies	24% ± 7%	Explore
interneuron	6 studies	51% ± 23%	Explore
macrophage	6 studies	31% ± 11%	Explore
retinal ganglion cell	6 studies	45% ± 27%	Explore
B cell	6 studies	25% ± 6%	Explore
dendritic cell	6 studies	19% ± 4%	Explore
CD16-positive, CD56-dim natural killer cell, human	5 studies	21% ± 5%	Explore
effector memory CD8-positive, alpha-beta T cell	5 studies	25% ± 9%	Explore
epithelial cell	5 studies	22% ± 8%	Explore
cardiac muscle cell	5 studies	30% ± 7%	Explore
lymphocyte	5 studies	39% ± 17%	Explore
smooth muscle cell	5 studies	25% ± 5%	Explore
CD8-positive, alpha-beta memory T cell	5 studies	19% ± 3%	Explore
regulatory T cell	5 studies	27% ± 9%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	4 studies	26% ± 7%	Explore
myofibroblast cell	4 studies	24% ± 6%	Explore
neuron	4 studies	35% ± 12%	Explore
granule cell	4 studies	36% ± 7%	Explore
adipocyte	4 studies	19% ± 5%	Explore
mucosal invariant T cell	4 studies	23% ± 10%	Explore
retina horizontal cell	4 studies	33% ± 13%	Explore
classical monocyte	3 studies	18% ± 2%	Explore
non-classical monocyte	3 studies	19% ± 3%	Explore
GABAergic interneuron	3 studies	35% ± 1%	Explore
glial cell	3 studies	23% ± 6%	Explore
CD16-negative, CD56-bright natural killer cell, human	3 studies	23% ± 5%	Explore
OFF-bipolar cell	3 studies	25% ± 7%	Explore
ON-bipolar cell	3 studies	24% ± 8%	Explore
amacrine cell	3 studies	24% ± 8%	Explore
glycinergic amacrine cell	3 studies	20% ± 5%	Explore
monocyte	3 studies	27% ± 6%	Explore
capillary endothelial cell	3 studies	25% ± 5%	Explore
gamma-delta T cell	3 studies	23% ± 8%	Explore
Schwann cell	3 studies	35% ± 23%	Explore
leukocyte	3 studies	48% ± 14%	Explore
mesothelial cell	3 studies	23% ± 4%	Explore
mural cell	3 studies	38% ± 19%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	17 studies	37% ± 21%	Explore
heart	4 studies	22% ± 3%	Explore
eye	3 studies	28% ± 9%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	917.03	2619 / 2642	100%	5.68	703 / 705
adrenal gland	100%	1602.17	258 / 258	97%	3.51	222 / 230
pancreas	98%	498.91	322 / 328	89%	2.34	159 / 178
lung	100%	1183.26	576 / 578	85%	2.28	987 / 1155
thymus	99%	862.69	649 / 653	84%	2.90	511 / 605
breast	100%	961.22	459 / 459	81%	2.10	903 / 1118
skin	91%	606.77	1649 / 1809	86%	4.27	405 / 472
prostate	99%	782.56	242 / 245	77%	1.55	387 / 502
ovary	100%	1847.04	180 / 180	76%	1.80	326 / 430
esophagus	90%	733.80	1304 / 1445	80%	2.12	146 / 183
kidney	88%	417.35	78 / 89	81%	2.74	732 / 901
uterus	99%	1369.07	169 / 170	67%	1.81	307 / 459
bladder	100%	1925.05	21 / 21	65%	1.59	327 / 504
stomach	100%	1225.47	359 / 359	57%	1.39	164 / 286
intestine	99%	1022.89	961 / 966	40%	0.94	211 / 527
liver	74%	263.19	168 / 226	26%	0.50	106 / 406
blood vessel	100%	1125.80	1335 / 1335	0%	0	0 / 0
muscle	100%	1699.81	803 / 803	0%	0	0 / 0
spleen	100%	1720.49	241 / 241	0%	0	0 / 0
adipose	100%	1188.11	1203 / 1204	0%	0	0 / 0
heart	98%	741.82	841 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	93%	4.86	27 / 29
peripheral blood	76%	676.81	710 / 929	0%	0	0 / 0
tonsil	0%	0	0 / 0	64%	1.48	29 / 45
eye	0%	0	0 / 0	40%	0.88	32 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1