Insufficient scRNA-seq data for expression of CCR9 at single-cell level.
Insufficient scRNA-seq data for expression of CCR9 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
spleen | 100% | 127.45 | 241 / 241 | 0% | 0 | 0 / 0 |
kidney | 79% | 17.22 | 70 / 89 | 16% | 0.38 | 140 / 901 |
lung | 85% | 10.95 | 493 / 578 | 3% | 0.07 | 38 / 1155 |
peripheral blood | 85% | 42.00 | 787 / 929 | 0% | 0 | 0 / 0 |
intestine | 77% | 146.08 | 742 / 966 | 4% | 0.09 | 23 / 527 |
thymus | 52% | 3.93 | 338 / 653 | 19% | 12.78 | 117 / 605 |
stomach | 66% | 6.63 | 237 / 359 | 4% | 0.06 | 11 / 286 |
pancreas | 48% | 3.58 | 156 / 328 | 22% | 0.41 | 39 / 178 |
breast | 67% | 6.57 | 309 / 459 | 1% | 0.01 | 7 / 1118 |
uterus | 64% | 5.95 | 109 / 170 | 1% | 0.02 | 4 / 459 |
liver | 62% | 5.26 | 139 / 226 | 1% | 0.04 | 5 / 406 |
muscle | 60% | 4.56 | 483 / 803 | 0% | 0 | 0 / 0 |
prostate | 56% | 5.34 | 137 / 245 | 0% | 0.00 | 1 / 502 |
adipose | 50% | 4.46 | 604 / 1204 | 0% | 0 | 0 / 0 |
skin | 43% | 3.15 | 776 / 1809 | 4% | 0.10 | 21 / 472 |
brain | 44% | 3.92 | 1163 / 2642 | 0% | 0.01 | 3 / 705 |
bladder | 43% | 2.14 | 9 / 21 | 1% | 0.02 | 6 / 504 |
esophagus | 39% | 2.53 | 567 / 1445 | 2% | 0.09 | 4 / 183 |
ovary | 41% | 2.43 | 74 / 180 | 0% | 0.00 | 1 / 430 |
blood vessel | 35% | 2.07 | 465 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 28% | 1.51 | 71 / 258 | 0% | 0.01 | 1 / 230 |
heart | 26% | 1.28 | 225 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.08 | 1 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006955 | Biological process | immune response |
GO_0007186 | Biological process | G protein-coupled receptor signaling pathway |
GO_0070098 | Biological process | chemokine-mediated signaling pathway |
GO_0007204 | Biological process | positive regulation of cytosolic calcium ion concentration |
GO_0006935 | Biological process | chemotaxis |
GO_0006968 | Biological process | cellular defense response |
GO_0019722 | Biological process | calcium-mediated signaling |
GO_0002305 | Biological process | CD8-positive, gamma-delta intraepithelial T cell differentiation |
GO_0060326 | Biological process | cell chemotaxis |
GO_0009986 | Cellular component | cell surface |
GO_0009897 | Cellular component | external side of plasma membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0016493 | Molecular function | C-C chemokine receptor activity |
GO_0019957 | Molecular function | C-C chemokine binding |
GO_0004950 | Molecular function | chemokine receptor activity |
Gene name | CCR9 |
Protein name | C-C chemokine receptor type 9 (C-C CKR-9) (CC-CKR-9) (CCR-9) (G-protein coupled receptor 28) (GPR-9-6) (CD antigen CDw199) C-C motif chemokine receptor 9 CCR9 chemokine receptor |
Synonyms | GPR28 |
Description | FUNCTION: Receptor for chemokine SCYA25/TECK. Subsequently transduces a signal by increasing the intracellular calcium ions level. .; FUNCTION: (Microbial infection) Alternative coreceptor with CD4 for HIV-1 infection. |
Accessions | P51686 C9JWC0 ENST00000395963.2 [P51686-2] ENST00000357632.7 [P51686-1] ENST00000706789.1 [P51686-2] ENST00000422395.1 Q9UN87 |