Name | Number of supported studies | Average coverage | |
---|---|---|---|
duct epithelial cell | 5 studies | 41% ± 18% | |
mucus secreting cell | 4 studies | 31% ± 10% | |
ciliated cell | 3 studies | 18% ± 1% | |
progenitor cell of mammary luminal epithelium | 3 studies | 46% ± 23% |
Insufficient scRNA-seq data for expression of CCL28 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 1802.80 | 652 / 653 | 90% | 15.73 | 545 / 605 |
pancreas | 98% | 738.20 | 321 / 328 | 87% | 20.58 | 154 / 178 |
skin | 93% | 697.70 | 1675 / 1809 | 92% | 16.80 | 433 / 472 |
breast | 94% | 3694.42 | 433 / 459 | 73% | 23.13 | 820 / 1118 |
stomach | 86% | 564.37 | 307 / 359 | 77% | 17.26 | 221 / 286 |
kidney | 83% | 355.75 | 74 / 89 | 78% | 22.71 | 705 / 901 |
intestine | 75% | 1308.33 | 722 / 966 | 86% | 20.52 | 453 / 527 |
esophagus | 90% | 295.91 | 1307 / 1445 | 69% | 22.86 | 127 / 183 |
uterus | 82% | 231.66 | 140 / 170 | 72% | 11.25 | 330 / 459 |
lung | 82% | 264.07 | 476 / 578 | 63% | 10.03 | 727 / 1155 |
ovary | 48% | 117.73 | 87 / 180 | 93% | 27.43 | 401 / 430 |
prostate | 96% | 367.10 | 236 / 245 | 40% | 2.68 | 202 / 502 |
bladder | 52% | 127.43 | 11 / 21 | 48% | 7.43 | 244 / 504 |
spleen | 100% | 656.65 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.09 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 96% | 17.01 | 77 / 80 |
blood vessel | 84% | 255.07 | 1126 / 1335 | 0% | 0 | 0 / 0 |
adipose | 79% | 226.55 | 953 / 1204 | 0% | 0 | 0 / 0 |
liver | 46% | 92.53 | 105 / 226 | 30% | 4.35 | 122 / 406 |
tonsil | 0% | 0 | 0 / 0 | 76% | 6.19 | 34 / 45 |
adrenal gland | 18% | 37.82 | 47 / 258 | 32% | 2.97 | 74 / 230 |
peripheral blood | 41% | 218.10 | 380 / 929 | 0% | 0 | 0 / 0 |
brain | 24% | 45.62 | 624 / 2642 | 2% | 0.16 | 12 / 705 |
heart | 22% | 44.34 | 192 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 17% | 1.33 | 5 / 29 |
muscle | 1% | 2.64 | 5 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1903237 | Biological process | negative regulation of leukocyte tethering or rolling |
GO_0007165 | Biological process | signal transduction |
GO_0007584 | Biological process | response to nutrient |
GO_0006955 | Biological process | immune response |
GO_0001954 | Biological process | positive regulation of cell-matrix adhesion |
GO_0007204 | Biological process | positive regulation of cytosolic calcium ion concentration |
GO_0006935 | Biological process | chemotaxis |
GO_0060326 | Biological process | cell chemotaxis |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005576 | Cellular component | extracellular region |
GO_0005515 | Molecular function | protein binding |
GO_0008009 | Molecular function | chemokine activity |
Gene name | CCL28 |
Protein name | C-C motif chemokine 28 (Mucosae-associated epithelial chemokine) (MEC) (Protein CCK1) (Small-inducible cytokine A28) C-C motif chemokine C-C motif chemokine ligand 28 (Chemokine (C-C motif) ligand 28, isoform CRA_b) |
Synonyms | SCYA28 hCG_36937 |
Description | FUNCTION: Chemotactic activity for resting CD4, CD8 T-cells and eosinophils. Binds to CCR3 and CCR10 and induces calcium mobilization in a dose-dependent manner. |
Accessions | ENST00000489442.5 [Q9NRJ3-1] D6RC73 A0N0Q3 Q9NRJ3 ENST00000513525.1 ENST00000361115.4 [Q9NRJ3-1] |