CCL1 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of CCL1 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	32%	1.62	183 / 578	9%	0.32	105 / 1155
brain	32%	1.70	840 / 2642	8%	0.31	59 / 705
lymph node	0%	0	0 / 0	34%	20.96	10 / 29
spleen	34%	1.10	82 / 241	0%	0	0 / 0
skin	16%	0.59	286 / 1809	6%	0.09	27 / 472
peripheral blood	19%	2.06	173 / 929	0%	0	0 / 0
intestine	9%	0.28	88 / 966	4%	0.07	19 / 527
bladder	10%	0.19	2 / 21	3%	0.10	16 / 504
tonsil	0%	0	0 / 0	11%	0.92	5 / 45
stomach	5%	0.11	17 / 359	4%	0.10	12 / 286
esophagus	6%	0.15	81 / 1445	3%	0.06	5 / 183
breast	5%	0.12	23 / 459	3%	0.10	35 / 1118
thymus	3%	0.11	22 / 653	4%	0.07	25 / 605
adrenal gland	2%	0.05	6 / 258	3%	0.14	8 / 230
prostate	5%	0.11	13 / 245	0%	0	0 / 502
uterus	1%	0.01	1 / 170	4%	0.07	19 / 459
blood vessel	5%	0.14	61 / 1335	0%	0	0 / 0
adipose	4%	0.13	54 / 1204	0%	0	0 / 0
liver	3%	0.08	7 / 226	1%	0.05	5 / 406
ovary	2%	0.03	3 / 180	1%	0.03	5 / 430
pancreas	3%	0.07	9 / 328	0%	0	0 / 178
heart	2%	0.03	13 / 861	0%	0	0 / 0
kidney	1%	0.02	1 / 89	0%	0.01	3 / 901
muscle	1%	0.03	11 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0007165	Biological process	signal transduction
GO_0016032	Biological process	viral process
GO_0061844	Biological process	antimicrobial humoral immune response mediated by antimicrobial peptide
GO_0090026	Biological process	positive regulation of monocyte chemotaxis
GO_0050729	Biological process	positive regulation of inflammatory response
GO_0070098	Biological process	chemokine-mediated signaling pathway
GO_0007204	Biological process	positive regulation of cytosolic calcium ion concentration
GO_0030335	Biological process	positive regulation of cell migration
GO_0006954	Biological process	inflammatory response
GO_0006874	Biological process	intracellular calcium ion homeostasis
GO_0006935	Biological process	chemotaxis
GO_0043547	Biological process	positive regulation of GTPase activity
GO_0032740	Biological process	positive regulation of interleukin-17 production
GO_0048245	Biological process	eosinophil chemotaxis
GO_0005615	Cellular component	extracellular space
GO_0005576	Cellular component	extracellular region
GO_0048020	Molecular function	CCR chemokine receptor binding
GO_0008009	Molecular function	chemokine activity

Gene name	CCL1
Protein name	C-C motif chemokine 1 (Small-inducible cytokine A1) (T lymphocyte-secreted protein I-309)
Synonyms	SCYA1
Description	FUNCTION: Cytokine that is chemotactic for monocytes but not for neutrophils. Binds to CCR8. .
Accessions	P22362 ENST00000225842.4

CCL1 report