Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 26% ± 11% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
eye | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2720.17 | 1444 / 1445 | 100% | 8.37 | 183 / 183 |
prostate | 100% | 2463.98 | 245 / 245 | 100% | 6.82 | 501 / 502 |
brain | 100% | 2885.59 | 2630 / 2642 | 99% | 5.42 | 695 / 705 |
intestine | 100% | 3213.19 | 966 / 966 | 98% | 5.42 | 516 / 527 |
stomach | 100% | 2234.14 | 359 / 359 | 98% | 5.63 | 279 / 286 |
pancreas | 100% | 1519.41 | 327 / 328 | 97% | 3.42 | 173 / 178 |
breast | 100% | 1592.44 | 458 / 459 | 97% | 4.10 | 1080 / 1118 |
ovary | 100% | 1884.76 | 180 / 180 | 96% | 6.30 | 414 / 430 |
lung | 100% | 2384.14 | 577 / 578 | 96% | 4.46 | 1111 / 1155 |
thymus | 100% | 2169.19 | 652 / 653 | 96% | 4.04 | 581 / 605 |
adrenal gland | 100% | 2697.95 | 258 / 258 | 95% | 6.45 | 219 / 230 |
uterus | 100% | 2589.95 | 170 / 170 | 95% | 5.50 | 435 / 459 |
bladder | 100% | 2391.05 | 21 / 21 | 93% | 3.87 | 468 / 504 |
kidney | 100% | 1863.73 | 89 / 89 | 90% | 2.92 | 808 / 901 |
skin | 96% | 2671.55 | 1745 / 1809 | 92% | 3.19 | 435 / 472 |
liver | 100% | 1231.87 | 225 / 226 | 83% | 2.34 | 337 / 406 |
spleen | 100% | 1338.82 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 6.96 | 45 / 45 |
muscle | 100% | 1211.02 | 801 / 803 | 0% | 0 | 0 / 0 |
adipose | 100% | 1410.82 | 1199 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 4.56 | 79 / 80 |
blood vessel | 98% | 1058.52 | 1309 / 1335 | 0% | 0 | 0 / 0 |
heart | 95% | 1449.41 | 821 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 74% | 758.50 | 688 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 55% | 0.94 | 16 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0021987 | Biological process | cerebral cortex development |
GO_0043296 | Cellular component | apical junction complex |
GO_0005912 | Cellular component | adherens junction |
GO_0005923 | Cellular component | bicellular tight junction |
GO_0005515 | Molecular function | protein binding |
Gene name | CCDC85C |
Protein name | Coiled-coil domain containing 85C Coiled-coil domain-containing protein 85C |
Synonyms | |
Description | FUNCTION: May play a role in cell-cell adhesion and epithelium development through its interaction with proteins of the beta-catenin family (Probable). May play an important role in cortical development, especially in the maintenance of radial glia (By similarity). . |
Accessions | ENST00000554877.1 G3V2D7 A6NKD9 H0YJE0 ENST00000555822.5 G3V4C8 ENST00000554996.5 ENST00000556348.1 H0YJY5 ENST00000557769.5 ENST00000557576.5 ENST00000380243.9 G3V5D5 |