Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 21 studies | 74% ± 18% | |
oligodendrocyte precursor cell | 12 studies | 35% ± 16% | |
microglial cell | 8 studies | 24% ± 8% | |
retinal cone cell | 6 studies | 34% ± 15% | |
GABAergic neuron | 5 studies | 35% ± 16% | |
astrocyte | 5 studies | 34% ± 14% | |
oligodendrocyte | 5 studies | 27% ± 12% | |
fibroblast | 5 studies | 21% ± 4% | |
macrophage | 5 studies | 20% ± 4% | |
deuterosomal cell | 4 studies | 36% ± 3% | |
epithelial cell | 4 studies | 38% ± 18% | |
retinal rod cell | 4 studies | 35% ± 10% | |
adipocyte | 4 studies | 31% ± 6% | |
glutamatergic neuron | 4 studies | 46% ± 16% | |
club cell | 4 studies | 29% ± 8% | |
type I pneumocyte | 4 studies | 20% ± 5% | |
basal cell | 4 studies | 24% ± 7% | |
endothelial cell | 3 studies | 29% ± 8% | |
ependymal cell | 3 studies | 68% ± 12% | |
respiratory goblet cell | 3 studies | 44% ± 17% | |
interneuron | 3 studies | 41% ± 16% | |
mucus secreting cell | 3 studies | 24% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 980.80 | 89 / 89 | 87% | 47.83 | 785 / 901 |
ovary | 100% | 1012.76 | 180 / 180 | 87% | 38.85 | 372 / 430 |
thymus | 100% | 2000.47 | 653 / 653 | 85% | 8.04 | 515 / 605 |
brain | 96% | 584.33 | 2536 / 2642 | 85% | 8.62 | 596 / 705 |
uterus | 100% | 1205.12 | 170 / 170 | 78% | 8.78 | 357 / 459 |
breast | 100% | 852.83 | 459 / 459 | 74% | 5.23 | 823 / 1118 |
pancreas | 85% | 313.16 | 278 / 328 | 84% | 6.11 | 149 / 178 |
esophagus | 100% | 1229.90 | 1441 / 1445 | 68% | 4.92 | 124 / 183 |
lung | 98% | 1065.67 | 568 / 578 | 62% | 5.11 | 716 / 1155 |
intestine | 100% | 1225.73 | 966 / 966 | 60% | 3.48 | 314 / 527 |
bladder | 100% | 1009.33 | 21 / 21 | 59% | 3.95 | 295 / 504 |
stomach | 99% | 1237.55 | 356 / 359 | 58% | 3.51 | 166 / 286 |
prostate | 100% | 1339.44 | 245 / 245 | 54% | 2.84 | 271 / 502 |
skin | 88% | 1130.12 | 1591 / 1809 | 39% | 2.34 | 184 / 472 |
liver | 79% | 349.65 | 178 / 226 | 33% | 2.16 | 136 / 406 |
spleen | 100% | 1035.22 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 99% | 838.60 | 1195 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1014.69 | 1315 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 84% | 295.89 | 217 / 258 | 11% | 0.45 | 25 / 230 |
heart | 88% | 466.67 | 754 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 84% | 7.27 | 38 / 45 |
lymph node | 0% | 0 | 0 / 0 | 41% | 2.36 | 12 / 29 |
peripheral blood | 39% | 125.92 | 363 / 929 | 0% | 0 | 0 / 0 |
muscle | 27% | 77.23 | 219 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 15% | 0.65 | 12 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007288 | Biological process | sperm axoneme assembly |
GO_0120316 | Biological process | sperm flagellum assembly |
GO_1905198 | Biological process | manchette assembly |
GO_0007286 | Biological process | spermatid development |
GO_0005814 | Cellular component | centriole |
GO_0005813 | Cellular component | centrosome |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005737 | Cellular component | cytoplasm |
GO_0120212 | Cellular component | sperm head-tail coupling apparatus |
GO_0005515 | Molecular function | protein binding |
Gene name | CCDC146 |
Protein name | CCDC146 protein Coiled-coil domain containing 146 Coiled-coil domain-containing protein 146 |
Synonyms | KIAA1505 |
Description | |
Accessions | ENST00000415750.5 C9JRR4 Q8IYE0 ENST00000285871.5 [Q8IYE0-1] Q8N2Z6 |