Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 26 studies | 38% ± 16% | |
conventional dendritic cell | 23 studies | 40% ± 16% | |
B cell | 22 studies | 24% ± 8% | |
non-classical monocyte | 21 studies | 58% ± 17% | |
classical monocyte | 20 studies | 30% ± 12% | |
monocyte | 18 studies | 39% ± 15% | |
naive B cell | 16 studies | 30% ± 11% | |
dendritic cell | 14 studies | 37% ± 13% | |
memory B cell | 10 studies | 23% ± 6% | |
myeloid cell | 8 studies | 32% ± 13% | |
plasmacytoid dendritic cell | 6 studies | 27% ± 8% | |
mononuclear phagocyte | 4 studies | 60% ± 18% | |
leukocyte | 4 studies | 34% ± 15% | |
pro-B cell | 4 studies | 42% ± 15% | |
hematopoietic precursor cell | 3 studies | 28% ± 8% | |
monocyte-derived dendritic cell | 3 studies | 49% ± 9% | |
hematopoietic stem cell | 3 studies | 21% ± 3% | |
precursor B cell | 3 studies | 28% ± 13% | |
immature B cell | 3 studies | 32% ± 13% | |
intermediate monocyte | 3 studies | 55% ± 23% | |
neutrophil | 3 studies | 22% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 4 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 96% | 70.20 | 173 / 180 | 81% | 5.15 | 349 / 430 |
lung | 99% | 147.16 | 573 / 578 | 73% | 3.74 | 841 / 1155 |
intestine | 95% | 161.45 | 918 / 966 | 62% | 3.65 | 329 / 527 |
breast | 96% | 73.13 | 442 / 459 | 53% | 2.30 | 596 / 1118 |
bladder | 95% | 86.62 | 20 / 21 | 50% | 3.43 | 253 / 504 |
stomach | 78% | 53.16 | 280 / 359 | 67% | 4.02 | 191 / 286 |
uterus | 81% | 39.75 | 138 / 170 | 59% | 3.33 | 269 / 459 |
kidney | 79% | 66.31 | 70 / 89 | 61% | 3.65 | 548 / 901 |
prostate | 94% | 107.26 | 230 / 245 | 39% | 0.84 | 195 / 502 |
esophagus | 74% | 45.31 | 1068 / 1445 | 57% | 1.89 | 105 / 183 |
skin | 69% | 41.47 | 1246 / 1809 | 62% | 6.03 | 293 / 472 |
liver | 79% | 59.89 | 179 / 226 | 35% | 1.46 | 141 / 406 |
adrenal gland | 97% | 102.53 | 249 / 258 | 11% | 0.35 | 25 / 230 |
brain | 79% | 72.70 | 2091 / 2642 | 28% | 0.95 | 199 / 705 |
thymus | 69% | 47.19 | 450 / 653 | 37% | 1.53 | 224 / 605 |
spleen | 100% | 2768.85 | 241 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 286.36 | 917 / 929 | 0% | 0 | 0 / 0 |
adipose | 99% | 109.45 | 1187 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 44.82 | 28 / 29 |
blood vessel | 89% | 70.69 | 1188 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 6.93 | 39 / 45 |
pancreas | 32% | 12.49 | 105 / 328 | 44% | 1.51 | 78 / 178 |
heart | 65% | 34.73 | 559 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 23% | 1.17 | 18 / 80 |
muscle | 21% | 5.91 | 166 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0098655 | Biological process | monoatomic cation transmembrane transport |
GO_0005886 | Cellular component | plasma membrane |
GO_0005261 | Molecular function | monoatomic cation channel activity |
GO_0005515 | Molecular function | protein binding |
Gene name | CALHM6 |
Protein name | Calcium homeostasis modulator family member 6 Calcium homeostasis modulator protein 6 (Protein FAM26F) |
Synonyms | FAM26F C6orf187 |
Description | FUNCTION: Pore-forming subunit of a voltage-gated ion channel. . |
Accessions | ENST00000368604.2 Q5R3K3 ENST00000368605.3 [Q5R3K3-1] Q5R3K2 ENST00000368606.7 [Q5R3K3-2] |