Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 15 studies | 24% ± 12% | |
oligodendrocyte | 14 studies | 42% ± 16% | |
endothelial cell of lymphatic vessel | 9 studies | 25% ± 17% | |
glutamatergic neuron | 8 studies | 34% ± 19% | |
ciliated cell | 7 studies | 29% ± 9% | |
astrocyte | 7 studies | 24% ± 6% | |
oligodendrocyte precursor cell | 7 studies | 26% ± 10% | |
neuron | 6 studies | 27% ± 12% | |
epithelial cell | 6 studies | 25% ± 10% | |
interneuron | 5 studies | 34% ± 14% | |
retinal cone cell | 5 studies | 32% ± 8% | |
GABAergic neuron | 5 studies | 33% ± 15% | |
granule cell | 4 studies | 33% ± 6% | |
pericyte | 4 studies | 26% ± 15% | |
retina horizontal cell | 4 studies | 20% ± 4% | |
retinal rod cell | 4 studies | 18% ± 3% | |
glomerular endothelial cell | 3 studies | 28% ± 1% | |
basal cell | 3 studies | 38% ± 16% | |
endothelial cell of vascular tree | 3 studies | 42% ± 27% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 6448.45 | 2635 / 2642 | 100% | 42.43 | 703 / 705 |
esophagus | 100% | 1797.52 | 1444 / 1445 | 99% | 27.02 | 182 / 183 |
ovary | 100% | 2410.66 | 180 / 180 | 99% | 22.54 | 425 / 430 |
prostate | 100% | 3158.06 | 245 / 245 | 99% | 17.64 | 496 / 502 |
adrenal gland | 100% | 3460.62 | 258 / 258 | 99% | 45.40 | 227 / 230 |
breast | 100% | 1973.18 | 459 / 459 | 99% | 23.26 | 1103 / 1118 |
pancreas | 100% | 1630.00 | 328 / 328 | 98% | 22.14 | 175 / 178 |
stomach | 100% | 3972.42 | 359 / 359 | 98% | 25.50 | 281 / 286 |
intestine | 100% | 2729.73 | 966 / 966 | 98% | 20.70 | 516 / 527 |
lung | 99% | 2425.00 | 575 / 578 | 98% | 20.21 | 1136 / 1155 |
bladder | 100% | 3740.33 | 21 / 21 | 98% | 22.54 | 493 / 504 |
thymus | 100% | 2498.13 | 651 / 653 | 97% | 17.97 | 588 / 605 |
uterus | 100% | 3209.19 | 170 / 170 | 97% | 28.65 | 443 / 459 |
kidney | 100% | 1854.94 | 89 / 89 | 95% | 24.72 | 857 / 901 |
skin | 100% | 2097.71 | 1804 / 1809 | 95% | 41.60 | 449 / 472 |
liver | 61% | 436.80 | 138 / 226 | 67% | 8.75 | 272 / 406 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.62 | 1 / 1 |
adipose | 100% | 1775.84 | 1202 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1714.76 | 1330 / 1335 | 0% | 0 | 0 / 0 |
spleen | 99% | 1303.89 | 239 / 241 | 0% | 0 | 0 / 0 |
muscle | 99% | 1264.42 | 796 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1677.21 | 851 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 16.80 | 43 / 45 |
eye | 0% | 0 | 0 / 0 | 93% | 24.98 | 74 / 80 |
peripheral blood | 11% | 135.70 | 103 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0021987 | Biological process | cerebral cortex development |
GO_0022008 | Biological process | neurogenesis |
GO_0048813 | Biological process | dendrite morphogenesis |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | BTBD3 |
Protein name | BTB/POZ domain-containing protein 3 BTBD3 protein BTB domain containing 3 |
Synonyms | KIAA0952 |
Description | FUNCTION: Acts as a key regulator of dendritic field orientation during development of sensory cortex. Also directs dendrites toward active axon terminals when ectopically expressed (By similarity). . |
Accessions | ENST00000618296.4 [Q9Y2F9-2] B0QYR1 Q52M42 F8WAQ4 ENST00000618918.4 [Q9Y2F9-2] ENST00000449299.5 ENST00000405977.5 [Q9Y2F9-1] ENST00000254977.7 [Q9Y2F9-2] Q9Y2F9 ENST00000399006.6 [Q9Y2F9-2] ENST00000430557.1 ENST00000422390.5 B0QYQ9 B0QYR0 ENST00000378226.7 [Q9Y2F9-1] ENST00000455911.5 |