Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 26% ± 8% | |
fibroblast | 8 studies | 21% ± 4% | |
glutamatergic neuron | 6 studies | 37% ± 18% | |
pericyte | 6 studies | 21% ± 3% | |
GABAergic neuron | 6 studies | 32% ± 16% | |
oligodendrocyte | 6 studies | 22% ± 6% | |
B cell | 5 studies | 22% ± 5% | |
CD4-positive, alpha-beta T cell | 5 studies | 23% ± 8% | |
epithelial cell | 5 studies | 36% ± 13% | |
goblet cell | 5 studies | 26% ± 10% | |
natural killer cell | 4 studies | 18% ± 3% | |
CD16-positive, CD56-dim natural killer cell, human | 4 studies | 18% ± 1% | |
neuron | 4 studies | 31% ± 10% | |
naive B cell | 4 studies | 17% ± 2% | |
type I pneumocyte | 4 studies | 21% ± 2% | |
astrocyte | 4 studies | 24% ± 5% | |
interneuron | 4 studies | 37% ± 19% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 3 studies | 21% ± 7% | |
capillary endothelial cell | 3 studies | 17% ± 0% | |
microglial cell | 3 studies | 20% ± 1% | |
oligodendrocyte precursor cell | 3 studies | 26% ± 7% | |
abnormal cell | 3 studies | 21% ± 4% | |
enteroendocrine cell | 3 studies | 22% ± 6% | |
CD8-positive, alpha-beta memory T cell | 3 studies | 16% ± 1% | |
regulatory T cell | 3 studies | 17% ± 2% | |
macrophage | 3 studies | 18% ± 3% | |
adipocyte | 3 studies | 19% ± 3% | |
hepatocyte | 3 studies | 35% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 6234.51 | 2642 / 2642 | 100% | 62.02 | 705 / 705 |
breast | 100% | 6117.30 | 459 / 459 | 100% | 62.49 | 1118 / 1118 |
esophagus | 100% | 5017.02 | 1445 / 1445 | 100% | 42.75 | 183 / 183 |
liver | 100% | 5633.62 | 226 / 226 | 100% | 35.75 | 406 / 406 |
ovary | 100% | 8074.30 | 180 / 180 | 100% | 42.99 | 430 / 430 |
pancreas | 100% | 4584.56 | 328 / 328 | 100% | 41.54 | 178 / 178 |
prostate | 100% | 6670.61 | 245 / 245 | 100% | 68.19 | 502 / 502 |
stomach | 100% | 4805.15 | 359 / 359 | 100% | 36.89 | 286 / 286 |
uterus | 100% | 6276.29 | 170 / 170 | 100% | 44.35 | 459 / 459 |
lung | 100% | 5330.04 | 578 / 578 | 100% | 45.29 | 1154 / 1155 |
thymus | 100% | 6373.00 | 653 / 653 | 100% | 54.39 | 604 / 605 |
intestine | 100% | 5486.22 | 966 / 966 | 100% | 37.39 | 526 / 527 |
bladder | 100% | 4981.00 | 21 / 21 | 100% | 41.55 | 503 / 504 |
kidney | 100% | 5209.99 | 89 / 89 | 100% | 39.42 | 898 / 901 |
skin | 100% | 5933.99 | 1809 / 1809 | 99% | 40.93 | 468 / 472 |
adrenal gland | 100% | 8855.78 | 258 / 258 | 99% | 44.34 | 228 / 230 |
adipose | 100% | 5651.70 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5115.04 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 25.85 | 29 / 29 |
spleen | 100% | 5642.70 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 44.62 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 18.53 | 1 / 1 |
muscle | 100% | 3710.66 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 3552.40 | 856 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 3196.71 | 911 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 21.39 | 75 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | BSDC1 |
Protein name | BSD domain containing 1 BSD domain-containing protein 1 |
Synonyms | UNQ2494/PRO5781 |
Description | |
Accessions | ENST00000446293.6 [Q9NW68-7] ENST00000527513.5 ENST00000341071.11 [Q9NW68-3] ENST00000455895.7 [Q9NW68-1] E9PQA7 E9PNA9 ENST00000530485.1 F8W6C6 ENST00000444377.5 [Q9NW68-2] ENST00000527163.5 ENST00000526031.5 [Q9NW68-9] ENST00000373520.8 ENST00000419121.6 [Q9NW68-8] Q9NW68 E9PS77 |