Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 19 studies | 44% ± 19% | |
microglial cell | 14 studies | 55% ± 16% | |
mast cell | 11 studies | 48% ± 13% | |
macrophage | 10 studies | 39% ± 16% | |
mesothelial cell | 9 studies | 58% ± 22% | |
adipocyte | 9 studies | 62% ± 13% | |
smooth muscle cell | 9 studies | 32% ± 12% | |
astrocyte | 7 studies | 39% ± 17% | |
myofibroblast cell | 6 studies | 34% ± 24% | |
natural killer cell | 5 studies | 33% ± 8% | |
endothelial cell | 5 studies | 30% ± 14% | |
myeloid cell | 4 studies | 34% ± 14% | |
epithelial cell | 4 studies | 35% ± 21% | |
vein endothelial cell | 3 studies | 31% ± 11% | |
basal cell | 3 studies | 43% ± 29% | |
endothelial cell of vascular tree | 3 studies | 18% ± 1% | |
connective tissue cell | 3 studies | 44% ± 29% | |
adventitial cell | 3 studies | 44% ± 24% | |
chondrocyte | 3 studies | 46% ± 18% | |
GABAergic neuron | 3 studies | 24% ± 7% | |
neuron | 3 studies | 36% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 10450.44 | 180 / 180 | 87% | 4.44 | 375 / 430 |
skin | 89% | 1974.75 | 1608 / 1809 | 96% | 9.83 | 455 / 472 |
kidney | 92% | 1229.53 | 82 / 89 | 91% | 5.37 | 823 / 901 |
breast | 98% | 1538.69 | 451 / 459 | 82% | 3.63 | 917 / 1118 |
prostate | 96% | 1613.45 | 234 / 245 | 66% | 1.55 | 329 / 502 |
lung | 98% | 1261.88 | 565 / 578 | 62% | 2.08 | 713 / 1155 |
esophagus | 93% | 2659.27 | 1347 / 1445 | 54% | 1.96 | 98 / 183 |
uterus | 99% | 11518.99 | 169 / 170 | 42% | 4.63 | 192 / 459 |
thymus | 79% | 687.82 | 516 / 653 | 60% | 2.54 | 360 / 605 |
bladder | 100% | 3030.38 | 21 / 21 | 37% | 1.23 | 185 / 504 |
intestine | 96% | 3559.82 | 924 / 966 | 39% | 1.12 | 205 / 527 |
stomach | 59% | 1318.46 | 212 / 359 | 51% | 2.25 | 147 / 286 |
eye | 0% | 0 | 0 / 0 | 100% | 13.88 | 80 / 80 |
adipose | 100% | 2207.09 | 1201 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 91% | 1031.69 | 1217 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 2% | 14.51 | 7 / 328 | 80% | 3.30 | 143 / 178 |
muscle | 81% | 817.04 | 649 / 803 | 0% | 0 | 0 / 0 |
heart | 54% | 485.31 | 464 / 861 | 0% | 0 | 0 / 0 |
adrenal gland | 42% | 309.09 | 108 / 258 | 8% | 0.23 | 19 / 230 |
tonsil | 0% | 0 | 0 / 0 | 47% | 1.37 | 21 / 45 |
brain | 2% | 14.73 | 51 / 2642 | 26% | 0.69 | 183 / 705 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.12 | 3 / 29 |
liver | 0% | 2.59 | 1 / 226 | 4% | 0.13 | 15 / 406 |
spleen | 3% | 17.47 | 8 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 2% | 9.03 | 14 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0060485 | Biological process | mesenchyme development |
GO_0060021 | Biological process | roof of mouth development |
GO_0043586 | Biological process | tongue development |
GO_0003416 | Biological process | endochondral bone growth |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0000182 | Molecular function | rDNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | BNC2 |
Protein name | Basonuclin 2 Zinc finger protein basonuclin-2 |
Synonyms | |
Description | FUNCTION: Probable transcription factor specific for skin keratinocytes. May play a role in the differentiation of spermatozoa and oocytes . May also play an important role in early urinary-tract development . . |
Accessions | A0A8V8TPU4 Q06HC6 ENST00000380666.6 ENST00000486514.5 ENST00000468187.6 Q06HC5 S4R3K9 A0A1B0GX98 Q06HB5 Q06HB8 ENST00000484726.5 [Q6ZN30-2] Q06HC1 Q06HC2 ENST00000471301.3 ENST00000603313.5 S4R3R8 Q06HB9 ENST00000700554.1 Q06HC3 Q6ZN30 ENST00000545497.5 ENST00000380672.9 [Q6ZN30-1] Q06HB6 Q06HC7 H0Y6W5 Q06HC4 F5H586 ENST00000617779.1 ENST00000700553.1 S4R351 H0Y4J1 ENST00000418777.5 Q06HB7 ENST00000613349.4 ENST00000380667.6 S4R3X5 ENST00000411752.5 Q06HC0 B1APH0 ENST00000603713.5 |