BEX5 report

Query

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
pancreatic A cell	4 studies	35% ± 7%	Explore
type B pancreatic cell	4 studies	34% ± 6%	Explore
glomerular endothelial cell	4 studies	34% ± 6%	Explore
endothelial cell	3 studies	27% ± 11%	Explore
retinal ganglion cell	3 studies	71% ± 15%	Explore
retina horizontal cell	3 studies	32% ± 17%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
pancreas	4 studies	28% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	2457.09	2628 / 2642	90%	37.79	633 / 705
thymus	100%	968.98	651 / 653	89%	47.81	540 / 605
pancreas	96%	481.86	316 / 328	86%	22.81	153 / 178
kidney	99%	603.63	88 / 89	81%	20.69	728 / 901
ovary	81%	378.93	145 / 180	62%	12.02	266 / 430
lung	83%	446.87	482 / 578	58%	10.13	669 / 1155
prostate	61%	197.25	149 / 245	77%	16.80	386 / 502
adrenal gland	33%	123.42	85 / 258	78%	54.96	179 / 230
breast	40%	113.00	183 / 459	66%	9.80	740 / 1118
stomach	51%	149.33	182 / 359	39%	7.32	111 / 286
uterus	51%	191.43	86 / 170	29%	10.48	131 / 459
blood vessel	66%	248.94	885 / 1335	0%	0	0 / 0
intestine	15%	36.68	143 / 966	43%	7.30	226 / 527
eye	0%	0	0 / 0	48%	8.68	38 / 80
liver	9%	21.85	20 / 226	36%	4.89	146 / 406
lymph node	0%	0	0 / 0	41%	3.84	12 / 29
esophagus	7%	17.02	101 / 1445	33%	3.89	60 / 183
bladder	0%	0	0 / 21	31%	5.28	158 / 504
spleen	30%	75.80	72 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	29%	2.80	13 / 45
skin	7%	15.44	121 / 1809	13%	1.88	63 / 472
heart	14%	35.73	120 / 861	0%	0	0 / 0
adipose	10%	24.89	119 / 1204	0%	0	0 / 0
peripheral blood	3%	7.86	29 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1