Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 34 studies | 27% ± 10% | |
smooth muscle cell | 19 studies | 23% ± 6% | |
pericyte | 19 studies | 22% ± 10% | |
endothelial cell of lymphatic vessel | 17 studies | 38% ± 11% | |
fibroblast | 17 studies | 23% ± 8% | |
capillary endothelial cell | 11 studies | 21% ± 5% | |
endothelial cell of artery | 10 studies | 28% ± 6% | |
vein endothelial cell | 8 studies | 19% ± 3% | |
type I pneumocyte | 7 studies | 23% ± 4% | |
myofibroblast cell | 7 studies | 22% ± 7% | |
secretory cell | 6 studies | 27% ± 12% | |
glutamatergic neuron | 6 studies | 39% ± 18% | |
epithelial cell | 6 studies | 39% ± 22% | |
endothelial cell of vascular tree | 6 studies | 22% ± 4% | |
astrocyte | 6 studies | 27% ± 9% | |
basal cell | 5 studies | 29% ± 14% | |
oligodendrocyte | 5 studies | 27% ± 7% | |
connective tissue cell | 5 studies | 22% ± 4% | |
type II pneumocyte | 4 studies | 23% ± 11% | |
non-classical monocyte | 4 studies | 24% ± 7% | |
neuron | 4 studies | 27% ± 10% | |
retinal ganglion cell | 4 studies | 47% ± 24% | |
ciliated cell | 4 studies | 33% ± 14% | |
macrophage | 4 studies | 22% ± 3% | |
glomerular endothelial cell | 3 studies | 31% ± 4% | |
cardiac muscle cell | 3 studies | 18% ± 2% | |
abnormal cell | 3 studies | 26% ± 12% | |
goblet cell | 3 studies | 20% ± 2% | |
plasmacytoid dendritic cell | 3 studies | 18% ± 3% | |
GABAergic neuron | 3 studies | 41% ± 11% | |
interneuron | 3 studies | 48% ± 15% | |
oligodendrocyte precursor cell | 3 studies | 32% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 2923.87 | 1805 / 1809 | 15% | 0.22 | 69 / 472 |
prostate | 100% | 2922.58 | 244 / 245 | 14% | 0.19 | 70 / 502 |
esophagus | 100% | 3510.93 | 1445 / 1445 | 10% | 0.14 | 18 / 183 |
thymus | 100% | 6339.18 | 653 / 653 | 9% | 0.12 | 52 / 605 |
breast | 100% | 3586.13 | 459 / 459 | 7% | 0.10 | 73 / 1118 |
lung | 100% | 3407.65 | 577 / 578 | 3% | 0.06 | 34 / 1155 |
bladder | 100% | 2843.00 | 21 / 21 | 2% | 0.05 | 12 / 504 |
uterus | 100% | 4719.66 | 170 / 170 | 2% | 0.02 | 7 / 459 |
intestine | 100% | 3398.72 | 966 / 966 | 1% | 0.02 | 6 / 527 |
brain | 100% | 3741.78 | 2641 / 2642 | 1% | 0.01 | 4 / 705 |
stomach | 99% | 2229.74 | 357 / 359 | 1% | 0.04 | 3 / 286 |
adrenal gland | 100% | 2125.17 | 258 / 258 | 0% | 0.00 | 1 / 230 |
ovary | 100% | 2602.08 | 180 / 180 | 0% | 0.00 | 1 / 430 |
adipose | 100% | 3955.69 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5764.86 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2932.42 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1991.10 | 241 / 241 | 0% | 0 | 0 / 0 |
kidney | 99% | 1715.49 | 88 / 89 | 1% | 0.02 | 8 / 901 |
heart | 99% | 3658.72 | 856 / 861 | 0% | 0 | 0 / 0 |
liver | 98% | 1304.52 | 221 / 226 | 0% | 0.00 | 1 / 406 |
pancreas | 94% | 1185.63 | 308 / 328 | 1% | 0.02 | 1 / 178 |
peripheral blood | 43% | 531.10 | 399 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.06 | 2 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006915 | Biological process | apoptotic process |
GO_0070973 | Biological process | protein localization to endoplasmic reticulum exit site |
GO_0006886 | Biological process | intracellular protein transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0001649 | Biological process | osteoblast differentiation |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
Gene name | BCAP29 |
Protein name | B-cell receptor-associated protein (BCR-associated protein) B-cell receptor-associated protein 29 (BCR-associated protein 29) (Bap29) |
Synonyms | BAP29 tcag7.984 hCG_17195 |
Description | FUNCTION: May play a role in anterograde transport of membrane proteins from the endoplasmic reticulum to the Golgi. May be involved in CASP8-mediated apoptosis (By similarity). . FUNCTION: Plays a role in the export of secreted proteins in the ER. . FUNCTION: Plays a role in the export of secreted proteins in the ER. . FUNCTION: Plays a role in the export of secreted proteins in the ER. . FUNCTION: Plays a role in the export of secreted proteins in the ER. . FUNCTION: Plays a role in the export of secreted proteins in the ER. . FUNCTION: Plays a role in the export of secreted proteins in the ER. . FUNCTION: Plays a role in the export of secreted proteins in the ER. . FUNCTION: Plays a role in the export of secreted proteins in the ER. . FUNCTION: Plays a role in the export of secreted proteins in the ER. . FUNCTION: Plays a role in the export of secreted proteins in the ER. . FUNCTION: Plays a role in the export of secreted proteins in the ER. . |
Accessions | A4D0R4 ENST00000479917.5 ENST00000640915.4 [Q9UHQ4-1] H7C5E2 ENST00000436699.2 ENST00000465919.5 ENST00000421217.5 F8WDG1 E9PAJ1 F8WB99 ENST00000640518.4 [Q9UHQ4-1] C9JP06 Q9UHQ4 B7Z2L0 H0Y7N8 ENST00000473124.1 ENST00000442065.5 ENST00000005259.9 [Q9UHQ4-1] C9JGJ9 ENST00000491150.5 C9JTE9 C9IYK6 ENST00000379117.6 [Q9UHQ4-1] ENST00000482371.5 ENST00000445771.6 [Q9UHQ4-2] ENST00000457837.5 |