BBOF1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	19 studies	50% ± 16%	Explore
deuterosomal cell	4 studies	30% ± 7%	Explore
retinal rod cell	4 studies	17% ± 1%	Explore
epithelial cell	3 studies	22% ± 3%	Explore
GABAergic neuron	3 studies	27% ± 4%	Explore
astrocyte	3 studies	30% ± 8%	Explore
glutamatergic neuron	3 studies	34% ± 8%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	3 studies	17% ± 1%	Explore
brain	3 studies	29% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	525.00	244 / 245	100%	4.91	502 / 502
breast	100%	447.81	459 / 459	99%	9.57	1108 / 1118
brain	100%	417.64	2635 / 2642	99%	3.54	700 / 705
thymus	100%	872.90	653 / 653	99%	6.84	596 / 605
ovary	100%	458.31	180 / 180	97%	3.96	418 / 430
kidney	100%	458.52	89 / 89	96%	4.61	869 / 901
lung	99%	428.20	571 / 578	95%	3.69	1100 / 1155
uterus	100%	553.87	170 / 170	92%	2.97	421 / 459
pancreas	89%	138.49	291 / 328	96%	3.25	171 / 178
esophagus	99%	382.62	1437 / 1445	85%	2.20	156 / 183
bladder	100%	414.29	21 / 21	81%	2.10	409 / 504
adrenal gland	96%	206.66	248 / 258	83%	1.77	190 / 230
skin	98%	260.76	1777 / 1809	76%	1.71	358 / 472
stomach	92%	239.71	329 / 359	74%	1.60	213 / 286
intestine	100%	419.58	962 / 966	61%	1.27	319 / 527
liver	77%	86.83	174 / 226	62%	1.28	253 / 406
ureter	0%	0	0 / 0	100%	5.06	1 / 1
blood vessel	100%	326.06	1334 / 1335	0%	0	0 / 0
adipose	100%	350.71	1201 / 1204	0%	0	0 / 0
heart	93%	206.76	801 / 861	0%	0	0 / 0
spleen	89%	124.25	214 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	87%	1.75	39 / 45
peripheral blood	80%	196.28	739 / 929	0%	0	0 / 0
muscle	73%	87.25	586 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	57%	1.05	46 / 80
lymph node	0%	0	0 / 0	31%	0.48	9 / 29
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0