Name | Number of supported studies | Average coverage | |
---|---|---|---|
smooth muscle cell | 7 studies | 22% ± 5% | |
pericyte | 7 studies | 21% ± 4% | |
type I pneumocyte | 6 studies | 22% ± 6% | |
endothelial cell | 6 studies | 25% ± 4% | |
CD8-positive, alpha-beta T cell | 6 studies | 19% ± 3% | |
natural killer cell | 5 studies | 19% ± 2% | |
CD8-positive, alpha-beta memory T cell | 5 studies | 22% ± 5% | |
gamma-delta T cell | 5 studies | 24% ± 9% | |
ionocyte | 4 studies | 35% ± 11% | |
pro-B cell | 4 studies | 30% ± 10% | |
regulatory T cell | 4 studies | 20% ± 4% | |
T cell | 3 studies | 18% ± 1% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 18% ± 1% | |
mucosal invariant T cell | 3 studies | 21% ± 3% | |
myeloid cell | 3 studies | 21% ± 3% | |
epithelial cell | 3 studies | 37% ± 13% | |
glutamatergic neuron | 3 studies | 23% ± 4% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 30% ± 15% |
Insufficient scRNA-seq data for expression of B3GNT2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 1795.38 | 578 / 578 | 100% | 53.75 | 1153 / 1155 |
breast | 100% | 1729.44 | 459 / 459 | 100% | 61.66 | 1116 / 1118 |
esophagus | 100% | 1280.84 | 1442 / 1445 | 99% | 48.23 | 182 / 183 |
pancreas | 100% | 1227.70 | 328 / 328 | 99% | 41.16 | 176 / 178 |
thymus | 100% | 1145.13 | 652 / 653 | 99% | 41.13 | 597 / 605 |
intestine | 99% | 1030.11 | 959 / 966 | 99% | 42.47 | 523 / 527 |
stomach | 100% | 1022.64 | 358 / 359 | 99% | 43.52 | 282 / 286 |
uterus | 100% | 1404.65 | 170 / 170 | 98% | 41.90 | 451 / 459 |
bladder | 100% | 717.67 | 21 / 21 | 98% | 38.63 | 492 / 504 |
kidney | 100% | 1187.08 | 89 / 89 | 97% | 49.93 | 877 / 901 |
skin | 100% | 1169.94 | 1807 / 1809 | 97% | 49.81 | 459 / 472 |
adrenal gland | 100% | 1253.85 | 258 / 258 | 95% | 58.59 | 219 / 230 |
prostate | 100% | 649.80 | 244 / 245 | 93% | 19.29 | 468 / 502 |
ovary | 89% | 549.12 | 160 / 180 | 100% | 52.00 | 430 / 430 |
liver | 100% | 819.56 | 226 / 226 | 82% | 16.66 | 331 / 406 |
brain | 88% | 784.38 | 2321 / 2642 | 90% | 14.54 | 638 / 705 |
adipose | 100% | 1554.52 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 38.91 | 29 / 29 |
spleen | 100% | 1145.44 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 35.86 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 32.62 | 1 / 1 |
blood vessel | 100% | 1345.22 | 1330 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 811.57 | 846 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 90% | 3046.79 | 839 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 84% | 17.64 | 67 / 80 |
muscle | 49% | 153.62 | 390 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016266 | Biological process | O-glycan processing |
GO_1990830 | Biological process | cellular response to leukemia inhibitory factor |
GO_0007608 | Biological process | sensory perception of smell |
GO_0030311 | Biological process | poly-N-acetyllactosamine biosynthetic process |
GO_0006493 | Biological process | protein O-linked glycosylation |
GO_0018146 | Biological process | keratan sulfate biosynthetic process |
GO_0007411 | Biological process | axon guidance |
GO_0000139 | Cellular component | Golgi membrane |
GO_0008499 | Molecular function | UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity |
GO_0005515 | Molecular function | protein binding |
GO_0008532 | Molecular function | N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity |
Gene name | B3GNT2 |
Protein name | N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 (EC 2.4.1.149) (Beta-1,3-N-acetylglucosaminyltransferase 1) (BGnT-1) (Beta-1,3-Gn-T1) (Beta3Gn-T1) (Beta-1,3-galactosyltransferase 7) (Beta-1,3-GalTase 7) (Beta3Gal-T7) (Beta3GalT7) (b3Gal-T7) (Beta-3-Gx-T7) (UDP-Gal:beta-GlcNAc beta-1,3-galactosyltransferase 7) (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2) (BGnT-2) (Beta-1,3-Gn-T2) (Beta-1,3-N-acetylglucosaminyltransferase 2) (Beta3Gn-T2) (UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase 7) |
Synonyms | B3GNT1 B3GALT7 |
Description | FUNCTION: Beta-1,3-N-acetylglucosaminyltransferase involved in the synthesis of poly-N-acetyllactosamine. Catalyzes the initiation and elongation of poly-N-acetyllactosamine chains. Shows a marked preference for Gal(beta1-4)Glc(NAc)-based acceptors . Probably constitutes the main polylactosamine synthase. . |
Accessions | Q9NY97 ENST00000301998.5 [Q9NY97-1] ENST00000405767.1 [Q9NY97-1] |