Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 25 studies | 27% ± 12% | |
macrophage | 23 studies | 32% ± 18% | |
fibroblast | 14 studies | 32% ± 17% | |
monocyte | 13 studies | 28% ± 8% | |
astrocyte | 13 studies | 31% ± 11% | |
classical monocyte | 12 studies | 34% ± 17% | |
endothelial cell of artery | 12 studies | 31% ± 12% | |
dendritic cell | 10 studies | 24% ± 10% | |
microglial cell | 10 studies | 29% ± 8% | |
ciliated cell | 9 studies | 25% ± 11% | |
oligodendrocyte precursor cell | 9 studies | 27% ± 12% | |
adipocyte | 9 studies | 37% ± 10% | |
GABAergic neuron | 8 studies | 36% ± 21% | |
pericyte | 8 studies | 30% ± 17% | |
myeloid cell | 8 studies | 34% ± 11% | |
smooth muscle cell | 8 studies | 22% ± 5% | |
epithelial cell | 7 studies | 36% ± 17% | |
basal cell | 7 studies | 24% ± 12% | |
type I pneumocyte | 6 studies | 22% ± 7% | |
non-classical monocyte | 6 studies | 24% ± 4% | |
glutamatergic neuron | 6 studies | 44% ± 25% | |
oligodendrocyte | 6 studies | 26% ± 8% | |
mononuclear phagocyte | 5 studies | 31% ± 14% | |
interneuron | 5 studies | 43% ± 24% | |
cardiac muscle cell | 5 studies | 33% ± 5% | |
hepatocyte | 5 studies | 48% ± 22% | |
leukocyte | 5 studies | 23% ± 5% | |
conventional dendritic cell | 4 studies | 28% ± 12% | |
abnormal cell | 4 studies | 24% ± 11% | |
neuron | 4 studies | 26% ± 10% | |
lymphocyte | 4 studies | 22% ± 3% | |
neutrophil | 3 studies | 24% ± 6% | |
hematopoietic precursor cell | 3 studies | 22% ± 4% | |
GABAergic interneuron | 3 studies | 23% ± 5% | |
granule cell | 3 studies | 19% ± 3% | |
mast cell | 3 studies | 28% ± 2% | |
retinal pigment epithelial cell | 3 studies | 34% ± 16% | |
mesothelial cell | 3 studies | 29% ± 3% | |
vein endothelial cell | 3 studies | 24% ± 7% | |
inflammatory macrophage | 3 studies | 33% ± 14% | |
endothelial cell of lymphatic vessel | 3 studies | 26% ± 8% | |
cholangiocyte | 3 studies | 52% ± 19% | |
pancreatic ductal cell | 3 studies | 49% ± 26% | |
alveolar macrophage | 3 studies | 39% ± 12% | |
club cell | 3 studies | 23% ± 4% | |
endothelial cell of vascular tree | 3 studies | 37% ± 11% | |
goblet cell | 3 studies | 36% ± 26% | |
transit amplifying cell | 3 studies | 34% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3973.99 | 1443 / 1445 | 100% | 63.95 | 183 / 183 |
lung | 99% | 8948.13 | 574 / 578 | 100% | 40.96 | 1150 / 1155 |
breast | 100% | 6115.72 | 458 / 459 | 98% | 34.34 | 1097 / 1118 |
stomach | 100% | 3859.00 | 359 / 359 | 98% | 39.15 | 280 / 286 |
ovary | 99% | 3862.14 | 179 / 180 | 98% | 25.16 | 423 / 430 |
intestine | 100% | 3955.98 | 965 / 966 | 97% | 31.97 | 511 / 527 |
thymus | 100% | 11522.96 | 653 / 653 | 97% | 42.19 | 585 / 605 |
uterus | 100% | 4752.31 | 170 / 170 | 97% | 35.47 | 443 / 459 |
liver | 100% | 7034.44 | 226 / 226 | 96% | 31.12 | 391 / 406 |
bladder | 100% | 4386.71 | 21 / 21 | 96% | 27.71 | 485 / 504 |
kidney | 100% | 4387.94 | 89 / 89 | 96% | 42.18 | 866 / 901 |
prostate | 100% | 3826.65 | 244 / 245 | 96% | 24.91 | 481 / 502 |
skin | 98% | 7015.83 | 1773 / 1809 | 91% | 24.60 | 431 / 472 |
brain | 93% | 2578.14 | 2452 / 2642 | 94% | 15.92 | 666 / 705 |
pancreas | 88% | 2190.57 | 289 / 328 | 98% | 27.47 | 174 / 178 |
adrenal gland | 100% | 5162.38 | 258 / 258 | 68% | 9.17 | 157 / 230 |
adipose | 100% | 8294.82 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 3696.75 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.71 | 1 / 1 |
blood vessel | 100% | 8756.73 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 7570.26 | 831 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 37.40 | 43 / 45 |
muscle | 91% | 2524.22 | 727 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 72% | 20.41 | 21 / 29 |
peripheral blood | 68% | 4036.20 | 636 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 59% | 9.70 | 47 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006874 | Biological process | intracellular calcium ion homeostasis |
GO_0098655 | Biological process | monoatomic cation transmembrane transport |
GO_1902047 | Biological process | polyamine transmembrane transport |
GO_0015847 | Biological process | putrescine transport |
GO_0031901 | Cellular component | early endosome membrane |
GO_0055038 | Cellular component | recycling endosome membrane |
GO_0031902 | Cellular component | late endosome membrane |
GO_0016020 | Cellular component | membrane |
GO_0140358 | Molecular function | P-type transmembrane transporter activity |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0015594 | Molecular function | ABC-type putrescine transporter activity |
GO_0019829 | Molecular function | ATPase-coupled monoatomic cation transmembrane transporter activity |
GO_0015203 | Molecular function | polyamine transmembrane transporter activity |
GO_0015662 | Molecular function | P-type ion transporter activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005524 | Molecular function | ATP binding |
Gene name | ATP13A3 |
Protein name | Polyamine-transporting ATPase 13A3 (ATPase family homolog up-regulated in senescence cells 1) (Putrescine transporting ATPase) (EC 7.6.2.16) ATPase 13A3 |
Synonyms | AFURS1 |
Description | FUNCTION: ATP-driven pump involved in endocytosis-dependent polyamine transport. Uses ATP as an energy source to transfer polyamine precursor putrescine from the endosomal compartment to the cytosol. . |
Accessions | Q9H7F0 ENST00000642744.2 ENST00000645319.2 ENST00000439040.6 [Q9H7F0-1] A0A2R8Y635 ENST00000645538.1 [Q9H7F0-1] A0A2R8YDN7 |