ATL1 | OmnibusX

Name	Number of supported studies	Average coverage
oligodendrocyte	13 studies	37% ± 13%	Explore
glutamatergic neuron	11 studies	50% ± 22%	Explore
oligodendrocyte precursor cell	10 studies	31% ± 14%	Explore
GABAergic neuron	8 studies	43% ± 20%	Explore
astrocyte	8 studies	25% ± 10%	Explore
neuron	7 studies	35% ± 12%	Explore
interneuron	7 studies	38% ± 21%	Explore
retinal ganglion cell	5 studies	46% ± 23%	Explore
endothelial cell	4 studies	31% ± 13%	Explore
GABAergic interneuron	3 studies	23% ± 3%	Explore
granule cell	3 studies	27% ± 6%	Explore

Name	Number of supported studies	Average coverage
brain	15 studies	37% ± 20%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	2431.41	2623 / 2642	99%	13.14	701 / 705
prostate	96%	507.16	235 / 245	98%	5.66	490 / 502
breast	95%	585.75	435 / 459	94%	4.47	1055 / 1118
intestine	99%	627.99	954 / 966	80%	1.85	422 / 527
ovary	99%	546.12	178 / 180	73%	1.56	315 / 430
bladder	95%	620.57	20 / 21	76%	2.06	384 / 504
adrenal gland	82%	316.16	211 / 258	88%	9.08	202 / 230
esophagus	91%	623.55	1310 / 1445	75%	1.85	137 / 183
uterus	99%	729.98	168 / 170	66%	2.06	305 / 459
lung	75%	272.06	436 / 578	85%	2.57	985 / 1155
skin	83%	580.71	1503 / 1809	77%	2.82	363 / 472
pancreas	62%	183.45	203 / 328	93%	2.80	166 / 178
stomach	80%	368.74	286 / 359	72%	1.72	207 / 286
thymus	68%	186.22	445 / 653	78%	1.58	471 / 605
kidney	38%	108.36	34 / 89	82%	2.68	735 / 901
blood vessel	99%	822.21	1328 / 1335	0%	0	0 / 0
adipose	90%	387.10	1089 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	59%	1.42	47 / 80
tonsil	0%	0	0 / 0	53%	1.22	24 / 45
lymph node	0%	0	0 / 0	34%	0.43	10 / 29
heart	20%	49.01	169 / 861	0%	0	0 / 0
liver	0%	0	0 / 226	8%	0.17	31 / 406
spleen	6%	13.13	14 / 241	0%	0	0 / 0
muscle	5%	11.66	38 / 803	0%	0	0 / 0
peripheral blood	0%	0.79	3 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0007409	Biological process	axonogenesis
GO_0007029	Biological process	endoplasmic reticulum organization
GO_1990809	Biological process	endoplasmic reticulum tubular network membrane organization
GO_0051260	Biological process	protein homooligomerization
GO_0071782	Cellular component	endoplasmic reticulum tubular network
GO_0000139	Cellular component	Golgi membrane
GO_0000137	Cellular component	Golgi cis cisterna
GO_0030424	Cellular component	axon
GO_0005783	Cellular component	endoplasmic reticulum
GO_0098826	Cellular component	endoplasmic reticulum tubular network membrane
GO_0005794	Cellular component	Golgi apparatus
GO_0016020	Cellular component	membrane
GO_0005789	Cellular component	endoplasmic reticulum membrane
GO_0005525	Molecular function	GTP binding
GO_0042802	Molecular function	identical protein binding
GO_0005515	Molecular function	protein binding
GO_0003924	Molecular function	GTPase activity

Gene name	ATL1
Protein name	Atlastin GTPase 1 (Spastic paraplegia 3A (Autosomal dominant), isoform CRA_d) Atlastin-1 Atlastin-1 (EC 3.6.5.-) (Brain-specific GTP-binding protein) (GTP-binding protein 3) (GBP-3) (hGBP3) (Guanine nucleotide-binding protein 3) (Spastic paraplegia 3 protein A) ATL1 zinc finger protein (ATL1-beta zinc finger protein) Atlastin GTPase 1
Synonyms	hCG_22028 SPG3A GBP3 ATL1-beta
Description	FUNCTION: GTPase tethering membranes through formation of trans-homooligomers and mediating homotypic fusion of endoplasmic reticulum membranes. Functions in endoplasmic reticulum tubular network biogenesis . May also regulate Golgi biogenesis. May regulate axonal development. .
Accessions	G3V5T4 A0A0S2Z5A2 A0A6I8PUC8 ENST00000674288.1 ENST00000682037.1 ENST00000556067.1 G3V334 ENST00000553509 G3V4Y8 H0YJ65 ENST00000553509.2 [Q8WXF7-2] A0A804HLC1 ENST00000441560.6 [Q8WXF7-2] A0A6I8PRS8 ENST00000557735.1 ENST00000556478.3 [Q8WXF7-2] G3V321 A0A6I8PIS8 ENST00000554886.1 H0YJA7 L8B8F6 A0A0S2Z5B0 ENST00000555960.5 ENST00000556478 ENST00000555266.1 Q8WXF7 ENST00000358385.12 [Q8WXF7-1] A0A0S2Z581 ENST00000674503.1 A0A0S2Z5B4

ATL1 report