Name | Number of supported studies | Average coverage | |
---|---|---|---|
classical monocyte | 22 studies | 34% ± 15% | |
monocyte | 13 studies | 23% ± 9% | |
non-classical monocyte | 8 studies | 21% ± 6% | |
hepatocyte | 6 studies | 78% ± 21% | |
conventional dendritic cell | 3 studies | 26% ± 7% | |
endothelial cell of lymphatic vessel | 3 studies | 22% ± 3% | |
endothelial cell | 3 studies | 29% ± 7% | |
macrophage | 3 studies | 25% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 35952.35 | 226 / 226 | 100% | 343.29 | 404 / 406 |
brain | 96% | 430.12 | 2547 / 2642 | 100% | 7.24 | 702 / 705 |
thymus | 100% | 302.77 | 650 / 653 | 89% | 3.47 | 541 / 605 |
lung | 99% | 286.42 | 573 / 578 | 73% | 2.25 | 848 / 1155 |
intestine | 55% | 51.65 | 527 / 966 | 71% | 3.97 | 374 / 527 |
skin | 79% | 149.49 | 1427 / 1809 | 46% | 1.14 | 216 / 472 |
uterus | 72% | 77.91 | 123 / 170 | 49% | 1.49 | 225 / 459 |
bladder | 52% | 74.86 | 11 / 21 | 65% | 2.19 | 328 / 504 |
adrenal gland | 65% | 63.12 | 168 / 258 | 52% | 1.65 | 119 / 230 |
stomach | 47% | 40.88 | 168 / 359 | 66% | 3.60 | 189 / 286 |
breast | 84% | 95.17 | 384 / 459 | 28% | 0.64 | 317 / 1118 |
prostate | 82% | 94.09 | 201 / 245 | 19% | 0.34 | 97 / 502 |
spleen | 100% | 279.22 | 241 / 241 | 0% | 0 | 0 / 0 |
pancreas | 9% | 7.67 | 28 / 328 | 83% | 2.54 | 148 / 178 |
adipose | 87% | 108.43 | 1049 / 1204 | 0% | 0 | 0 / 0 |
kidney | 39% | 38.56 | 35 / 89 | 45% | 1.06 | 407 / 901 |
peripheral blood | 81% | 527.61 | 753 / 929 | 0% | 0 | 0 / 0 |
esophagus | 54% | 51.59 | 786 / 1445 | 26% | 1.33 | 47 / 183 |
lymph node | 0% | 0 | 0 / 0 | 79% | 3.23 | 23 / 29 |
ovary | 41% | 39.89 | 74 / 180 | 27% | 0.43 | 114 / 430 |
tonsil | 0% | 0 | 0 / 0 | 38% | 0.79 | 17 / 45 |
blood vessel | 29% | 31.49 | 391 / 1335 | 0% | 0 | 0 / 0 |
heart | 14% | 13.52 | 123 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 13% | 0.18 | 10 / 80 |
muscle | 0% | 0.38 | 4 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0044419 | Biological process | biological process involved in interspecies interaction between organisms |
GO_0006898 | Biological process | receptor-mediated endocytosis |
GO_0009897 | Cellular component | external side of plasma membrane |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0042806 | Molecular function | fucose binding |
GO_0005537 | Molecular function | D-mannose binding |
GO_0004873 | Molecular function | asialoglycoprotein receptor activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ASGR1 |
Protein name | Asialoglycoprotein receptor 1 ASGR1 protein (Asialoglycoprotein receptor 1) Asialoglycoprotein receptor 1 (ASGP-R 1) (ASGPR 1) (C-type lectin domain family 4 member H1) (Hepatic lectin H1) (HL-1) |
Synonyms | hCG_1985284 CLEC4H1 |
Description | FUNCTION: Mediates the endocytosis of plasma glycoproteins to which the terminal sialic acid residue on their complex carbohydrate moieties has been removed. The receptor recognizes terminal galactose and N-acetylgalactosamine units. After ligand binding to the receptor, the resulting complex is internalized and transported to a sorting organelle, where receptor and ligand are disassociated. The receptor then returns to the cell membrane surface. |
Accessions | I3L1F8 ENST00000269299.8 [P07306-1] ENST00000570576.1 ENST00000574388.5 [P07306-2] ENST00000380920.8 J3QSZ2 I3L129 Q6FGQ5 ENST00000573083.1 I3L2S9 ENST00000619926.4 [P07306-2] K7EPS5 ENST00000574330.5 ENST00000572879.5 P07306 |