Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 9 studies | 47% ± 24% | |
retinal rod cell | 8 studies | 41% ± 14% | |
astrocyte | 8 studies | 29% ± 10% | |
amacrine cell | 7 studies | 36% ± 12% | |
oligodendrocyte precursor cell | 7 studies | 30% ± 6% | |
retinal cone cell | 7 studies | 55% ± 12% | |
interneuron | 6 studies | 45% ± 17% | |
GABAergic neuron | 6 studies | 45% ± 22% | |
neuron | 5 studies | 29% ± 7% | |
retinal bipolar neuron | 5 studies | 40% ± 8% | |
retinal ganglion cell | 5 studies | 38% ± 15% | |
epithelial cell | 5 studies | 21% ± 2% | |
retina horizontal cell | 4 studies | 27% ± 5% | |
OFF-bipolar cell | 4 studies | 29% ± 10% | |
ON-bipolar cell | 4 studies | 42% ± 16% | |
endothelial cell | 3 studies | 45% ± 8% | |
GABAergic interneuron | 3 studies | 32% ± 7% | |
cardiac muscle cell | 3 studies | 22% ± 1% | |
GABAergic amacrine cell | 3 studies | 34% ± 14% | |
rod bipolar cell | 3 studies | 53% ± 7% | |
oligodendrocyte | 3 studies | 31% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 9840.55 | 2639 / 2642 | 100% | 24.94 | 705 / 705 |
prostate | 99% | 2342.22 | 243 / 245 | 99% | 6.28 | 496 / 502 |
thymus | 99% | 2082.68 | 648 / 653 | 98% | 6.39 | 592 / 605 |
adrenal gland | 99% | 2087.17 | 256 / 258 | 96% | 20.32 | 221 / 230 |
kidney | 99% | 1630.56 | 88 / 89 | 96% | 6.49 | 868 / 901 |
intestine | 100% | 2763.78 | 966 / 966 | 94% | 4.52 | 496 / 527 |
breast | 94% | 1691.00 | 431 / 459 | 97% | 7.65 | 1088 / 1118 |
ovary | 100% | 2838.66 | 180 / 180 | 91% | 4.51 | 392 / 430 |
bladder | 100% | 3723.24 | 21 / 21 | 91% | 4.36 | 459 / 504 |
stomach | 95% | 1562.07 | 341 / 359 | 95% | 4.98 | 271 / 286 |
skin | 97% | 1879.69 | 1763 / 1809 | 90% | 5.05 | 425 / 472 |
uterus | 99% | 2344.62 | 169 / 170 | 84% | 4.59 | 384 / 459 |
lung | 94% | 1534.04 | 545 / 578 | 88% | 4.30 | 1019 / 1155 |
esophagus | 97% | 1843.84 | 1396 / 1445 | 83% | 3.92 | 151 / 183 |
pancreas | 32% | 341.04 | 106 / 328 | 97% | 5.31 | 172 / 178 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.37 | 1 / 1 |
blood vessel | 100% | 6390.45 | 1334 / 1335 | 0% | 0 | 0 / 0 |
spleen | 99% | 1582.18 | 239 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 4.39 | 28 / 29 |
heart | 91% | 3635.81 | 787 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 85% | 4.24 | 68 / 80 |
adipose | 82% | 1325.60 | 986 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 69% | 3.01 | 31 / 45 |
liver | 18% | 182.34 | 40 / 226 | 48% | 1.67 | 194 / 406 |
peripheral blood | 25% | 516.87 | 229 / 929 | 0% | 0 | 0 / 0 |
muscle | 13% | 128.28 | 103 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051056 | Biological process | regulation of small GTPase mediated signal transduction |
GO_0099150 | Biological process | regulation of postsynaptic specialization assembly |
GO_0099572 | Cellular component | postsynaptic specialization |
GO_0098982 | Cellular component | GABA-ergic synapse |
GO_0005829 | Cellular component | cytosol |
GO_0014069 | Cellular component | postsynaptic density |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | ARHGEF9 |
Protein name | Cdc42 guanine nucleotide exchange factor 9 Rho guanine nucleotide exchange factor 9 (Collybistin) (Rac/Cdc42 guanine nucleotide exchange factor 9) Rho guanine nucleotide exchange factor 9 (Collybistin) (PEM-2 homolog) (Rac/Cdc42 guanine nucleotide exchange factor 9) |
Synonyms | KIAA0424 ARHDH9 hCG_17692 |
Description | FUNCTION: Acts as a guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters (By similarity). . FUNCTION: Acts as a guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters. . FUNCTION: Acts as a guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters. . FUNCTION: Acts as a guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters. . FUNCTION: Acts as a guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters. . FUNCTION: Acts as a guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters. . FUNCTION: Acts as a guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters. . FUNCTION: Acts as a guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters. . FUNCTION: Acts as a guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters. . FUNCTION: Acts as a guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters. . FUNCTION: Acts as a guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters. . |
Accessions | A0A1B0GVX8 ENST00000637557.1 A0A0A6YYF8 A0A1B0GVV2 ENST00000637855.1 ENST00000437457.6 ENST00000636102.1 ENST00000671741.2 A0A096LPE7 B1AMR3 ENST00000624538.2 ENST00000638021.1 ENST00000374878.5 A0A096LPI8 ENST00000635967.1 ENST00000636048.1 B1AMR4 ENST00000495564.5 ENST00000636926.1 ENST00000639092.1 ENST00000466925.4 ENST00000637520.1 A0A1B0GTF0 ENST00000635729.1 A0A5F9ZI31 A0A1B0GWI5 ENST00000637040.1 A0A2X0SYV8 ENST00000623566.3 O43307 ENST00000637723.2 A0A1B0GU85 ENST00000636276.1 A0A1B0GVC4 ENST00000624210.3 ENST00000671907.1 [O43307-1] A0A096LP05 ENST00000624355.1 ENST00000374870.8 ENST00000636392.1 A0A096LNQ4 ENST00000623517.3 [O43307-2] ENST00000636145.1 ENST00000637178.1 A0A0A6YYB3 A0A5F9ZHY9 A0A1B0GV84 A0A1B0GV82 A0A1W2PQW9 ENST00000672513.1 ENST00000374872.4 ENST00000624843.3 [O43307-3] ENST00000623417.3 A0A096LNK7 A0A5F9ZGZ3 ENST00000672194.1 ENST00000637417.1 ENST00000625116.3 ENST00000253401.10 [O43307-1] A0A096LNK4 |