Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 13 studies | 37% ± 18% | |
macrophage | 10 studies | 31% ± 14% | |
smooth muscle cell | 9 studies | 24% ± 11% | |
microglial cell | 7 studies | 25% ± 8% | |
adipocyte | 7 studies | 19% ± 3% | |
glutamatergic neuron | 5 studies | 33% ± 15% | |
neuron | 5 studies | 32% ± 19% | |
epithelial cell | 5 studies | 28% ± 11% | |
goblet cell | 5 studies | 24% ± 9% | |
cardiac muscle cell | 4 studies | 27% ± 2% | |
myeloid cell | 4 studies | 32% ± 4% | |
GABAergic neuron | 4 studies | 36% ± 14% | |
fibroblast | 4 studies | 21% ± 6% | |
endothelial cell | 3 studies | 32% ± 10% | |
granule cell | 3 studies | 26% ± 8% | |
Mueller cell | 3 studies | 19% ± 4% | |
cholangiocyte | 3 studies | 51% ± 19% | |
hepatocyte | 3 studies | 73% ± 17% | |
retinal pigment epithelial cell | 3 studies | 32% ± 19% | |
oligodendrocyte precursor cell | 3 studies | 26% ± 7% | |
alveolar macrophage | 3 studies | 34% ± 9% | |
monocyte | 3 studies | 24% ± 7% | |
transit amplifying cell | 3 studies | 25% ± 7% | |
brush cell | 3 studies | 30% ± 4% | |
interneuron | 3 studies | 35% ± 21% | |
mucus secreting cell | 3 studies | 28% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 28% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 13471.22 | 226 / 226 | 100% | 35.87 | 404 / 406 |
pancreas | 100% | 6539.61 | 328 / 328 | 99% | 27.86 | 177 / 178 |
kidney | 100% | 8132.91 | 89 / 89 | 99% | 28.62 | 893 / 901 |
intestine | 100% | 5982.65 | 966 / 966 | 99% | 40.66 | 522 / 527 |
stomach | 100% | 4122.92 | 359 / 359 | 99% | 35.49 | 283 / 286 |
prostate | 100% | 5223.20 | 245 / 245 | 99% | 15.84 | 496 / 502 |
breast | 99% | 4267.15 | 455 / 459 | 99% | 22.32 | 1104 / 1118 |
bladder | 100% | 6270.71 | 21 / 21 | 98% | 31.76 | 493 / 504 |
esophagus | 100% | 6785.13 | 1445 / 1445 | 97% | 25.82 | 178 / 183 |
uterus | 99% | 4023.65 | 169 / 170 | 96% | 21.93 | 442 / 459 |
thymus | 100% | 4985.57 | 651 / 653 | 93% | 21.31 | 564 / 605 |
lung | 98% | 3337.59 | 566 / 578 | 95% | 16.94 | 1093 / 1155 |
brain | 92% | 5656.33 | 2432 / 2642 | 100% | 50.47 | 704 / 705 |
skin | 97% | 6913.71 | 1748 / 1809 | 95% | 16.81 | 449 / 472 |
adrenal gland | 93% | 2383.46 | 239 / 258 | 84% | 20.96 | 193 / 230 |
ovary | 85% | 2256.73 | 153 / 180 | 81% | 9.91 | 348 / 430 |
blood vessel | 100% | 16041.37 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.91 | 1 / 1 |
muscle | 100% | 6497.68 | 800 / 803 | 0% | 0 | 0 / 0 |
adipose | 99% | 4396.69 | 1186 / 1204 | 0% | 0 | 0 / 0 |
spleen | 96% | 2535.61 | 232 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 13.30 | 77 / 80 |
heart | 93% | 4384.24 | 803 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 17.74 | 41 / 45 |
lymph node | 0% | 0 | 0 / 0 | 72% | 11.22 | 21 / 29 |
peripheral blood | 4% | 63.15 | 34 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051056 | Biological process | regulation of small GTPase mediated signal transduction |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0032933 | Biological process | SREBP signaling pathway |
GO_0051496 | Biological process | positive regulation of stress fiber assembly |
GO_0005829 | Cellular component | cytosol |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | ARHGEF10L |
Protein name | ARHGEF10L Rho guanine nucleotide exchange factor 10-like protein (GrinchGEF) Rho guanine nucleotide exchange factor 10 like |
Synonyms | GRINCHGEF KIAA1626 |
Description | FUNCTION: Acts as a guanine nucleotide exchange factor (GEF) for RHOA, RHOB and RHOC. . |
Accessions | ENST00000361221.8 [Q9HCE6-1] ENST00000375415.5 [Q9HCE6-2] Q5VXI4 ENST00000375408.7 Q9HCE6 ENST00000167825.5 A0A2X0U2F8 A0A384DVK7 |