Insufficient scRNA-seq data for expression of ACOD1 at single-cell level.
Insufficient scRNA-seq data for expression of ACOD1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 66% | 3.30 | 59 / 89 | 1% | 0.03 | 7 / 901 |
lung | 54% | 15.78 | 314 / 578 | 4% | 0.07 | 48 / 1155 |
spleen | 56% | 5.66 | 134 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 34% | 2.42 | 314 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 28% | 6.68 | 8 / 29 |
skin | 19% | 0.91 | 336 / 1809 | 6% | 0.36 | 29 / 472 |
adipose | 23% | 8.79 | 273 / 1204 | 0% | 0 | 0 / 0 |
liver | 18% | 1.11 | 40 / 226 | 0% | 0 | 0 / 406 |
bladder | 14% | 0.33 | 3 / 21 | 2% | 0.04 | 10 / 504 |
uterus | 14% | 0.54 | 23 / 170 | 2% | 0.03 | 8 / 459 |
intestine | 14% | 5.34 | 133 / 966 | 1% | 0.02 | 7 / 527 |
stomach | 13% | 7.45 | 45 / 359 | 2% | 0.04 | 6 / 286 |
brain | 13% | 0.63 | 355 / 2642 | 0% | 0.00 | 1 / 705 |
adrenal gland | 12% | 1.90 | 32 / 258 | 0% | 0 | 0 / 230 |
breast | 9% | 0.28 | 42 / 459 | 1% | 0.03 | 16 / 1118 |
blood vessel | 10% | 0.40 | 139 / 1335 | 0% | 0 | 0 / 0 |
prostate | 10% | 0.72 | 25 / 245 | 0% | 0 | 0 / 502 |
esophagus | 7% | 0.69 | 100 / 1445 | 3% | 0.08 | 6 / 183 |
ovary | 9% | 0.52 | 17 / 180 | 1% | 0.02 | 3 / 430 |
heart | 8% | 0.78 | 71 / 861 | 0% | 0 | 0 / 0 |
thymus | 6% | 2.79 | 39 / 653 | 0% | 0 | 0 / 605 |
pancreas | 5% | 0.18 | 18 / 328 | 0% | 0 | 0 / 178 |
muscle | 5% | 0.12 | 39 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.06 | 2 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006952 | Biological process | defense response |
GO_0006954 | Biological process | inflammatory response |
GO_0034136 | Biological process | negative regulation of toll-like receptor 2 signaling pathway |
GO_0071219 | Biological process | cellular response to molecule of bacterial origin |
GO_0051607 | Biological process | defense response to virus |
GO_0034144 | Biological process | negative regulation of toll-like receptor 4 signaling pathway |
GO_0071347 | Biological process | cellular response to interleukin-1 |
GO_0032088 | Biological process | negative regulation of NF-kappaB transcription factor activity |
GO_0035458 | Biological process | cellular response to interferon-beta |
GO_0032480 | Biological process | negative regulation of type I interferon production |
GO_0071356 | Biological process | cellular response to tumor necrosis factor |
GO_0045824 | Biological process | negative regulation of innate immune response |
GO_0050728 | Biological process | negative regulation of inflammatory response |
GO_0002760 | Biological process | positive regulation of antimicrobial humoral response |
GO_2000379 | Biological process | positive regulation of reactive oxygen species metabolic process |
GO_0071222 | Biological process | cellular response to lipopolysaccharide |
GO_0072573 | Biological process | tolerance induction to lipopolysaccharide |
GO_0071393 | Biological process | cellular response to progesterone stimulus |
GO_0007566 | Biological process | embryo implantation |
GO_0071346 | Biological process | cellular response to type II interferon |
GO_0005739 | Cellular component | mitochondrion |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0047613 | Molecular function | aconitate decarboxylase activity |
Gene name | ACOD1 |
Protein name | Cis-aconitate decarboxylase (CAD) (EC 4.1.1.6) (Aconitate decarboxylase) (Aconitate decarboxylase 1) (Cis-aconitic acid decarboxylase) (Immune-responsive gene 1 protein) |
Synonyms | IRG1 |
Description | FUNCTION: Cis-aconitate decarboxylase that catalyzes production of itaconate and is involved in the inhibition of the inflammatory response . Acts as a negative regulator of the Toll-like receptors (TLRs)-mediated inflammatory innate response by stimulating the tumor necrosis factor alpha-induced protein TNFAIP3 expression via reactive oxygen species (ROS) in LPS-tolerized macrophages . Involved in antimicrobial response of innate immune cells; ACOD1-mediated itaconic acid production contributes to the antimicrobial activity of macrophages by generating itaconate, leading to alkylation of proteins, such as TFEB . Involved in antiviral response following infection by flavivirus in neurons: ACOD1-mediated itaconate production inhibits the activity of succinate dehydrogenase, generating a metabolic state in neurons that suppresses replication of viral genomes (By similarity). Plays a role in the embryo implantation (By similarity). . |
Accessions | A6NK06 ENST00000377462.6 |