Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| astrocyte | 8 studies | 29% ± 15% | |
| endothelial cell | 4 studies | 23% ± 7% | |
| ciliated cell | 4 studies | 26% ± 9% | |
| fibroblast | 4 studies | 17% ± 2% | |
| oligodendrocyte | 4 studies | 22% ± 5% | |
| microglial cell | 3 studies | 17% ± 1% | |
| macrophage | 3 studies | 19% ± 3% | |
| glutamatergic neuron | 3 studies | 40% ± 17% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 29% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 298.24 | 245 / 245 | 98% | 2.14 | 490 / 502 |
| esophagus | 100% | 179.66 | 1439 / 1445 | 95% | 2.37 | 173 / 183 |
| brain | 100% | 230.35 | 2635 / 2642 | 93% | 2.04 | 658 / 705 |
| uterus | 100% | 283.37 | 170 / 170 | 92% | 2.45 | 423 / 459 |
| stomach | 100% | 166.81 | 359 / 359 | 90% | 1.99 | 258 / 286 |
| bladder | 100% | 237.90 | 21 / 21 | 89% | 1.90 | 448 / 504 |
| ovary | 99% | 296.59 | 179 / 180 | 88% | 2.10 | 379 / 430 |
| intestine | 100% | 207.25 | 966 / 966 | 87% | 1.70 | 461 / 527 |
| kidney | 100% | 254.81 | 89 / 89 | 86% | 1.56 | 777 / 901 |
| breast | 100% | 228.07 | 459 / 459 | 84% | 1.69 | 940 / 1118 |
| lung | 100% | 234.58 | 576 / 578 | 84% | 1.92 | 975 / 1155 |
| thymus | 100% | 326.29 | 653 / 653 | 83% | 1.54 | 503 / 605 |
| pancreas | 99% | 137.26 | 325 / 328 | 82% | 1.46 | 146 / 178 |
| adrenal gland | 100% | 261.25 | 258 / 258 | 75% | 1.30 | 173 / 230 |
| skin | 100% | 285.85 | 1809 / 1809 | 61% | 1.12 | 286 / 472 |
| liver | 100% | 124.17 | 225 / 226 | 37% | 0.64 | 151 / 406 |
| spleen | 100% | 239.45 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 2.72 | 45 / 45 |
| adipose | 100% | 197.51 | 1198 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 99% | 146.66 | 797 / 803 | 0% | 0 | 0 / 0 |
| blood vessel | 99% | 141.92 | 1323 / 1335 | 0% | 0 | 0 / 0 |
| heart | 98% | 214.20 | 848 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 97% | 1.49 | 28 / 29 |
| peripheral blood | 71% | 99.08 | 660 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 61% | 0.84 | 49 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0005634 | Cellular component | nucleus |
| GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | ZSCAN5A |
| Protein name | Zinc finger and SCAN domain containing 5A Zinc finger and SCAN domain-containing protein 5A (Zinc finger protein 495) |
| Synonyms | ZSCAN5 ZNF495 |
| Description | FUNCTION: May be involved in transcriptional regulation. |
| Accessions | ENST00000592679.5 ENST00000588955.5 K7ESN6 A0A0C4DGQ1 K7ESE4 ENST00000588442.5 Q9BUG6 K7EQW6 ENST00000683990.1 [Q9BUG6-1] K7EN85 ENST00000593106.5 ENST00000592509.5 K7EMC4 K7EIX9 ENST00000587492.5 ENST00000587340.5 [Q9BUG6-1] ENST00000391713.5 [Q9BUG6-1] ENST00000592355.5 |
