Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 7 studies | 19% ± 4% | |
epithelial cell | 4 studies | 20% ± 3% | |
classical monocyte | 3 studies | 21% ± 5% | |
non-classical monocyte | 3 studies | 26% ± 7% | |
ciliated cell | 3 studies | 22% ± 4% | |
lymphocyte | 3 studies | 19% ± 2% | |
GABAergic neuron | 3 studies | 29% ± 7% | |
glutamatergic neuron | 3 studies | 34% ± 9% | |
dendritic cell | 3 studies | 23% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 776.11 | 258 / 258 | 100% | 23.43 | 230 / 230 |
bladder | 100% | 1252.05 | 21 / 21 | 100% | 20.94 | 504 / 504 |
esophagus | 100% | 1157.76 | 1445 / 1445 | 100% | 15.65 | 183 / 183 |
thymus | 100% | 1287.91 | 653 / 653 | 100% | 36.20 | 605 / 605 |
uterus | 100% | 1721.38 | 170 / 170 | 100% | 30.73 | 459 / 459 |
brain | 100% | 1149.96 | 2640 / 2642 | 100% | 22.64 | 705 / 705 |
intestine | 100% | 1351.80 | 966 / 966 | 100% | 19.75 | 526 / 527 |
prostate | 100% | 1310.90 | 245 / 245 | 100% | 19.56 | 501 / 502 |
lung | 100% | 1415.28 | 578 / 578 | 100% | 18.88 | 1152 / 1155 |
kidney | 100% | 895.16 | 89 / 89 | 100% | 19.85 | 898 / 901 |
stomach | 100% | 812.84 | 359 / 359 | 100% | 19.25 | 285 / 286 |
breast | 100% | 1050.97 | 459 / 459 | 100% | 30.96 | 1113 / 1118 |
skin | 100% | 915.03 | 1808 / 1809 | 100% | 23.01 | 470 / 472 |
ovary | 100% | 1444.03 | 180 / 180 | 99% | 13.98 | 427 / 430 |
pancreas | 99% | 539.16 | 325 / 328 | 99% | 23.36 | 177 / 178 |
liver | 99% | 479.06 | 223 / 226 | 97% | 11.06 | 395 / 406 |
adipose | 100% | 989.81 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1563.01 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 16.16 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 41.90 | 29 / 29 |
spleen | 100% | 2164.36 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 18.79 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.91 | 1 / 1 |
muscle | 100% | 794.82 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 689.60 | 851 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 1105.90 | 916 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0000398 | Biological process | mRNA splicing, via spliceosome |
GO_0000245 | Biological process | spliceosomal complex assembly |
GO_0008380 | Biological process | RNA splicing |
GO_0089701 | Cellular component | U2AF complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005681 | Cellular component | spliceosomal complex |
GO_0005689 | Cellular component | U12-type spliceosomal complex |
GO_0030628 | Molecular function | pre-mRNA 3'-splice site binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZRSR2 |
Protein name | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 (CCCH type zinc finger, RNA-binding motif and serine/arginine rich protein 2) (Renal carcinoma antigen NY-REN-20) (U2(RNU2) small nuclear RNA auxiliary factor 1-like 2) (U2AF35-related protein) (URP) Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 |
Synonyms | U2AF1RS2 U2AF1L2 URP U2AF1-RS2 |
Description | FUNCTION: Pre-mRNA-binding protein required for splicing of both U2- and U12-type introns. Selectively interacts with the 3'-splice site of U2- and U12-type pre-mRNAs and promotes different steps in U2 and U12 intron splicing. Recruited to U12 pre-mRNAs in an ATP-dependent manner and is required for assembly of the prespliceosome, a precursor to other spliceosomal complexes. For U2-type introns, it is selectively and specifically required for the second step of splicing. . |
Accessions | ENST00000684799.1 A0A8I5QKS0 ENST00000690252.1 A6NDW0 ENST00000691502.1 Q86VN0 ENST00000380308.7 A0A8I5KSD0 A0A8I5KRH1 Q15696 ENST00000307771.8 |