Name | Number of supported studies | Average coverage | |
---|---|---|---|
retinal rod cell | 8 studies | 32% ± 9% | |
endothelial cell | 7 studies | 21% ± 4% | |
retinal cone cell | 7 studies | 35% ± 13% | |
astrocyte | 6 studies | 28% ± 12% | |
epithelial cell | 5 studies | 24% ± 4% | |
GABAergic neuron | 4 studies | 41% ± 16% | |
glutamatergic neuron | 4 studies | 48% ± 17% | |
oligodendrocyte precursor cell | 4 studies | 26% ± 11% | |
endothelial cell of lymphatic vessel | 4 studies | 20% ± 3% | |
interneuron | 4 studies | 38% ± 23% | |
oligodendrocyte | 4 studies | 23% ± 2% | |
retinal bipolar neuron | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 5154.40 | 245 / 245 | 100% | 33.16 | 502 / 502 |
thymus | 100% | 4965.70 | 653 / 653 | 100% | 23.71 | 605 / 605 |
ovary | 100% | 3430.24 | 180 / 180 | 100% | 19.31 | 429 / 430 |
breast | 100% | 3080.18 | 459 / 459 | 100% | 24.78 | 1115 / 1118 |
brain | 100% | 2543.30 | 2633 / 2642 | 100% | 19.40 | 705 / 705 |
kidney | 100% | 3206.78 | 89 / 89 | 99% | 16.48 | 893 / 901 |
adrenal gland | 100% | 4075.43 | 258 / 258 | 99% | 17.76 | 227 / 230 |
skin | 100% | 2505.53 | 1809 / 1809 | 98% | 16.59 | 464 / 472 |
pancreas | 100% | 1314.73 | 327 / 328 | 98% | 15.46 | 175 / 178 |
bladder | 100% | 2815.19 | 21 / 21 | 97% | 15.44 | 491 / 504 |
stomach | 100% | 1971.56 | 359 / 359 | 97% | 10.28 | 278 / 286 |
lung | 100% | 2307.53 | 578 / 578 | 97% | 14.44 | 1115 / 1155 |
esophagus | 100% | 2273.79 | 1445 / 1445 | 96% | 12.10 | 176 / 183 |
intestine | 100% | 2565.21 | 966 / 966 | 95% | 9.88 | 503 / 527 |
uterus | 100% | 3227.46 | 170 / 170 | 94% | 14.44 | 432 / 459 |
liver | 99% | 1105.82 | 223 / 226 | 71% | 6.89 | 288 / 406 |
adipose | 100% | 2303.09 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 25.73 | 80 / 80 |
spleen | 100% | 3482.23 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.47 | 1 / 1 |
blood vessel | 100% | 2180.85 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 2264.96 | 857 / 861 | 0% | 0 | 0 / 0 |
muscle | 98% | 1279.60 | 789 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 9.20 | 27 / 29 |
tonsil | 0% | 0 | 0 / 0 | 87% | 9.00 | 39 / 45 |
peripheral blood | 74% | 914.21 | 683 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | ZNF875 |
Protein name | Zinc finger protein 875 Zinc finger protein 875 (Krueppel-related zinc finger protein 1) (Protein HKR1) GLI-Kruppel family member HKR1, isoform CRA_d (Zinc finger protein 875) HKR1 protein (Zinc finger protein 875) |
Synonyms | hCG_42404 HKR1 |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | K7EL05 Q7Z6E1 ENST00000541583.6 ENST00000591391.5 ENST00000544914.5 A0A494C010 ENST00000589188.5 ENST00000591259.5 K7EJS1 K7ERA5 ENST00000591134.5 K7ENA5 K7EL22 K7EME6 ENST00000590166.1 K7EQG8 K7EM51 K7EMG8 ENST00000591417.5 ENST00000591471.5 ENST00000590582.2 ENST00000589801.1 K7EMJ9 ENST00000652615.1 ENST00000592168.5 F5H6A5 ENST00000324411.8 [P10072-1] K7ES32 ENST00000589392.5 ENST00000392153.8 [P10072-2] K7EPW3 K7EL36 P10072 A0A1B0GXI2 ENST00000592768.5 ENST00000587437.5 ENST00000586897.1 ENST00000585623.5 |