Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| GABAergic neuron | 5 studies | 24% ± 10% | |
| glutamatergic neuron | 4 studies | 31% ± 11% | |
| astrocyte | 3 studies | 20% ± 4% | |
| interneuron | 3 studies | 31% ± 20% | |
| oligodendrocyte | 3 studies | 18% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 24% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 1754.31 | 245 / 245 | 100% | 6.48 | 502 / 502 |
| breast | 100% | 746.93 | 459 / 459 | 100% | 4.29 | 1113 / 1118 |
| brain | 100% | 756.10 | 2632 / 2642 | 100% | 6.29 | 704 / 705 |
| thymus | 100% | 1145.77 | 653 / 653 | 99% | 4.25 | 601 / 605 |
| uterus | 100% | 1013.76 | 170 / 170 | 99% | 4.13 | 455 / 459 |
| ovary | 100% | 1001.61 | 180 / 180 | 99% | 4.19 | 426 / 430 |
| intestine | 100% | 954.05 | 966 / 966 | 99% | 5.06 | 522 / 527 |
| bladder | 100% | 613.43 | 21 / 21 | 99% | 4.42 | 499 / 504 |
| stomach | 100% | 584.78 | 359 / 359 | 99% | 4.80 | 282 / 286 |
| lung | 100% | 618.20 | 576 / 578 | 99% | 4.49 | 1142 / 1155 |
| esophagus | 100% | 568.58 | 1445 / 1445 | 98% | 5.94 | 180 / 183 |
| skin | 100% | 704.47 | 1808 / 1809 | 98% | 5.80 | 464 / 472 |
| pancreas | 100% | 518.02 | 327 / 328 | 98% | 4.37 | 175 / 178 |
| adrenal gland | 100% | 644.29 | 258 / 258 | 98% | 3.02 | 225 / 230 |
| kidney | 100% | 876.33 | 89 / 89 | 96% | 4.11 | 867 / 901 |
| liver | 98% | 441.25 | 222 / 226 | 80% | 1.92 | 323 / 406 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 5.47 | 29 / 29 |
| spleen | 100% | 1156.28 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 2.71 | 1 / 1 |
| adipose | 100% | 584.79 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 585.18 | 1330 / 1335 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 96% | 2.80 | 43 / 45 |
| heart | 93% | 277.83 | 800 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 89% | 3.78 | 71 / 80 |
| peripheral blood | 79% | 438.44 | 730 / 929 | 0% | 0 | 0 / 0 |
| muscle | 74% | 179.06 | 594 / 803 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005634 | Cellular component | nucleus |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | ZNF789 |
| Protein name | Zinc finger protein 789 |
| Synonyms | |
| Description | FUNCTION: May be involved in transcriptional regulation. |
| Accessions | Q5FWF6 ENST00000379724.3 [Q5FWF6-3] C9J487 ENST00000448667.5 C9JUE3 ENST00000331410.10 [Q5FWF6-1] ENST00000493485.5 ENST00000447047.6 ENST00000483089.5 C9J3R7 F8WEN0 |
